Loyal A. Goff
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/cummeRbund |
| Branch: RELEASE_3_6 |
| Last Commit: 778300b |
| Last Changed Date: 2017-10-30 12:39:36 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:21:15 -0400 (Thu, 12 Apr 2018).
| Package 318/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| cummeRbund 2.20.0 Loyal A. Goff
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: cummeRbund |
| Version: 2.20.0 |
| Command: cd cummeRbund.buildbin-libdir/cummeRbund && zip -r ../../cummeRbund_2.20.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:33:13 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:33:52 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 39.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: cummeRbund_2.20.0.zip |
| PackageFileSize: 7.348 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd cummeRbund.buildbin-libdir/cummeRbund && zip -r ../../cummeRbund_2.20.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/sampleData.rda (332 bytes security) (stored 0%) adding: data/sampleData.RData (332 bytes security) (deflated 4%) adding: DESCRIPTION (332 bytes security) (deflated 48%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/cummeRbund-example-workflow.pdf (332 bytes security) (deflated 19%) adding: doc/cummeRbund-example-workflow.R (332 bytes security) (deflated 84%) adding: doc/cummeRbund-example-workflow.Rnw (332 bytes security) (deflated 62%) adding: doc/cummeRbund-manual.pdf (332 bytes security) (deflated 50%) adding: doc/cummeRbund-manual.R (332 bytes security) (deflated 86%) adding: doc/cummeRbund-manual.Rnw (332 bytes security) (deflated 72%) adding: doc/index.html (332 bytes security) (deflated 69%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/cds.count_tracking (332 bytes security) (deflated 57%) adding: extdata/cds.diff (332 bytes security) (deflated 85%) adding: extdata/cds.fpkm_tracking (332 bytes security) (deflated 67%) adding: extdata/cds.read_group_tracking (332 bytes security) (deflated 66%) adding: extdata/cds_exp.diff (332 bytes security) (deflated 73%) adding: extdata/chr1_snippet.gtf (332 bytes security) (deflated 95%) adding: extdata/cuffData.db (332 bytes security) (deflated 68%) adding: extdata/cuffData_schema.sql (332 bytes security) (deflated 89%) adding: extdata/genes.count_tracking (332 bytes security) (deflated 62%) adding: extdata/genes.fpkm_tracking (332 bytes security) (deflated 60%) adding: extdata/genes.read_group_tracking (332 bytes security) (deflated 70%) adding: extdata/gene_exp.diff (332 bytes security) (deflated 65%) adding: extdata/isoforms.count_tracking (332 bytes security) (deflated 62%) adding: extdata/isoforms.fpkm_tracking (332 bytes security) (deflated 68%) adding: extdata/isoforms.read_group_tracking (332 bytes security) (deflated 72%) adding: extdata/isoform_exp.diff (332 bytes security) (deflated 75%) adding: extdata/promoters.diff (332 bytes security) (deflated 79%) adding: extdata/read_groups.info (332 bytes security) (deflated 47%) adding: extdata/run.info (332 bytes security) (deflated 31%) adding: extdata/splicing.diff (332 bytes security) (deflated 82%) adding: extdata/tss_groups.count_tracking (332 bytes security) (deflated 58%) adding: extdata/tss_groups.fpkm_tracking (332 bytes security) (deflated 64%) adding: extdata/tss_groups.read_group_tracking (332 bytes security) (deflated 67%) adding: extdata/tss_group_exp.diff (332 bytes security) (deflated 70%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 84%) adding: help/cummeRbund.rdb (332 bytes security) (deflated 3%) adding: help/cummeRbund.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 88%) adding: html/addFeatures.html (332 bytes security) (deflated 54%) adding: html/count.html (332 bytes security) (deflated 53%) adding: html/countMatrix.html (332 bytes security) (deflated 57%) adding: html/csBoxplot.html (332 bytes security) (deflated 56%) adding: html/csCluster.html (332 bytes security) (deflated 54%) adding: html/csClusterPlot.html (332 bytes security) (deflated 58%) adding: html/csDendro.html (332 bytes security) (deflated 56%) adding: html/csDensity.html (332 bytes security) (deflated 59%) adding: html/csDistHeat.html (332 bytes security) (deflated 58%) adding: html/csHeatmap.html (332 bytes security) (deflated 64%) adding: html/csScatter.html (332 bytes security) (deflated 62%) adding: html/csSpecificity.html (332 bytes security) (deflated 55%) adding: html/csVolcano.html (332 bytes security) (deflated 58%) adding: html/CuffData-class.html (332 bytes security) (deflated 60%) adding: html/CuffDist-class.html (332 bytes security) (deflated 58%) adding: html/CuffFeature-class.html (332 bytes security) (deflated 64%) adding: html/CuffFeatureSet-class.html (332 bytes security) (deflated 69%) adding: html/CuffGene-class.html (332 bytes security) (deflated 72%) adding: html/CuffGeneSet-class.html (332 bytes security) (deflated 71%) adding: html/CuffSet-class.html (332 bytes security) (deflated 71%) adding: html/cummeRbund-package.html (332 bytes security) (deflated 73%) adding: html/diffData.html (332 bytes security) (deflated 58%) adding: html/dimensionality.html (332 bytes security) (deflated 60%) adding: html/dispersionPlot.html (332 bytes security) (deflated 52%) adding: html/distValues.html (332 bytes security) (deflated 53%) adding: html/exploratory.html (332 bytes security) (deflated 59%) adding: html/expressionBarplot.html (332 bytes security) (deflated 60%) adding: html/expressionPlot.html (332 bytes security) (deflated 62%) adding: html/featureNames.html (332 bytes security) (deflated 51%) adding: html/features.html (332 bytes security) (deflated 49%) adding: html/findGene.html (332 bytes security) (deflated 51%) adding: html/findSimilar.html (332 bytes security) (deflated 56%) adding: html/fpkm.html (332 bytes security) (deflated 52%) adding: html/fpkmMatrix.html (332 bytes security) (deflated 57%) adding: html/getFeatures.html (332 bytes security) (deflated 54%) adding: html/getGene.html (332 bytes security) (deflated 53%) adding: html/getGeneId.html (332 bytes security) (deflated 51%) adding: html/getGenes.html (332 bytes security) (deflated 53%) adding: html/getLevels.html (332 bytes security) (deflated 48%) adding: html/getRepLevels.html (332 bytes security) (deflated 47%) adding: html/getSig.html (332 bytes security) (deflated 56%) adding: html/getSigTable.html (332 bytes security) (deflated 52%) adding: html/JSdist.html (332 bytes security) (deflated 53%) adding: html/JSdistFromP.html (332 bytes security) (deflated 54%) adding: html/JSdistVec.html (332 bytes security) (deflated 52%) adding: html/makeprobs.html (332 bytes security) (deflated 53%) adding: html/makeprobsvec.html (332 bytes security) (deflated 49%) adding: html/MAplot.html (332 bytes security) (deflated 57%) adding: html/PINK1.html (332 bytes security) (deflated 47%) adding: html/QCplots.html (332 bytes security) (deflated 52%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/readCufflinks.html (332 bytes security) (deflated 71%) adding: html/repFpkm.html (332 bytes security) (deflated 53%) adding: html/replicates.html (332 bytes security) (deflated 51%) adding: html/runInfo.html (332 bytes security) (deflated 52%) adding: html/sampleGeneSet.html (332 bytes security) (deflated 48%) adding: html/sampleIDs.html (332 bytes security) (deflated 47%) adding: html/samples.html (332 bytes security) (deflated 51%) adding: html/shannon.entropy.html (332 bytes security) (deflated 51%) adding: html/sigMatrix.html (332 bytes security) (deflated 52%) adding: INDEX (332 bytes security) (deflated 69%) adding: MD5 (332 bytes security) (deflated 51%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (deflated 2%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 60%) adding: NEWS (332 bytes security) (deflated 62%) adding: R/ (372 bytes security) (stored 0%) adding: R/cummeRbund (332 bytes security) (deflated 41%) adding: R/cummeRbund.rdb (332 bytes security) (deflated 29%) adding: R/cummeRbund.rdx (332 bytes security) (deflated 5%) adding: reports/ (372 bytes security) (stored 0%) adding: reports/runReport.Rmd (332 bytes security) (deflated 55%) adding: reports/styles/ (372 bytes security) (stored 0%) adding: reports/styles/report_style.css (332 bytes security) (deflated 60%)