destiny 2.4.4
Philipp Angerer
| Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/destiny | | Last Changed Rev: 131284 / Revision: 131943 | | Last Changed Date: 2017-07-17 10:40:13 -0400 (Mon, 17 Jul 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | | |
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ ERROR ] | ERROR | skipped | skipped | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | ERROR | ERROR | skipped | skipped | |
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### Running command:
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### rm -rf destiny.buildbin-libdir && mkdir destiny.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/destiny_2.4.4.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=destiny.buildbin-libdir --merge-multiarch destiny_2.4.4.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL destiny_2.4.4.zip && rm destiny_2.4.4.tar.gz destiny_2.4.4.zip
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install for i386
* installing *source* package 'destiny' ...
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppEigen/include" -I"C:/local323/include" -ggdb -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppEigen/include" -I"C:/local323/include" -ggdb -O2 -Wall -mtune=core2 -c censoring.cpp -o censoring.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppEigen/include" -I"C:/local323/include" -ggdb -O2 -Wall -mtune=core2 -c no_censoring.cpp -o no_censoring.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o destiny.dll tmp.def RcppExports.o censoring.o no_censoring.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.5-bioc/meat/destiny.buildbin-libdir/destiny/libs/i386
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'DPT.ipynbmeta' using 'UTF-8'
Warning: running command '"jupyter" nbconvert --to script DPT.ipynb' had status 65535
Error in nbconvert(file, "script", ...) :
The call ""jupyter" "nbconvert" "--to" "script" "DPT.ipynb"" failed with exit status 65535
ERROR: installing vignettes failed
* removing 'C:/Users/biocbuild/bbs-3.5-bioc/meat/destiny.buildbin-libdir/destiny'
Warning: running command 'C:/Users/biocbuild/bbs-3.5-bioc/R/bin/i386/Rcmd.exe INSTALL --library=destiny.buildbin-libdir destiny_2.4.4.tar.gz --no-multiarch' had status 1