MADSEQ 1.2.0
Yu Kong
| Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/MADSEQ | | Last Changed Rev: 129126 / Revision: 131943 | | Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd MADSEQ.buildbin-libdir/MADSEQ && zip -r ../../MADSEQ_1.2.0.zip . & cd ../..
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adding: data/ (304 bytes security) (stored 0%)
adding: data/Rdata.rdb (264 bytes security) (deflated 0%)
adding: data/Rdata.rds (264 bytes security) (deflated 1%)
adding: data/Rdata.rdx (264 bytes security) (stored 0%)
adding: DESCRIPTION (264 bytes security) (deflated 43%)
adding: doc/ (304 bytes security) (stored 0%)
adding: doc/index.html (264 bytes security) (deflated 59%)
adding: doc/MADSEQ-vignette.html (264 bytes security) (deflated 56%)
adding: doc/MADSEQ-vignette.R (264 bytes security) (deflated 75%)
adding: doc/MADSEQ-vignette.Rmd (264 bytes security) (deflated 70%)
adding: extdata/ (304 bytes security) (stored 0%)
adding: extdata/aneuploidy.bam (264 bytes security) (deflated 0%)
adding: extdata/aneuploidy.bam.bai (264 bytes security) (deflated 98%)
adding: extdata/aneuploidy.vcf.gz (264 bytes security) (stored 0%)
adding: extdata/aneuploidy.vcf.gz.tbi (264 bytes security) (deflated 2%)
adding: extdata/aneuploidy.vcf1.gz (264 bytes security) (stored 0%)
adding: extdata/normal.bam (264 bytes security) (deflated 0%)
adding: extdata/normal.bam.bai (264 bytes security) (deflated 98%)
adding: extdata/normal.vcf.gz (264 bytes security) (stored 0%)
adding: extdata/target.bed (264 bytes security) (deflated 64%)
adding: help/ (304 bytes security) (stored 0%)
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adding: help/AnIndex (264 bytes security) (deflated 66%)
adding: help/MADSEQ.rdb (264 bytes security) (deflated 1%)
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adding: help/paths.rds (264 bytes security) (stored 0%)
adding: html/ (304 bytes security) (stored 0%)
adding: html/00Index.html (264 bytes security) (deflated 73%)
adding: html/R.css (264 bytes security) (deflated 75%)
adding: INDEX (264 bytes security) (deflated 62%)
adding: MD5 (264 bytes security) (deflated 46%)
adding: Meta/ (304 bytes security) (stored 0%)
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adding: Meta/package.rds (264 bytes security) (stored 0%)
adding: Meta/Rd.rds (264 bytes security) (stored 0%)
adding: Meta/vignette.rds (264 bytes security) (stored 0%)
adding: NAMESPACE (264 bytes security) (deflated 64%)
adding: NEWS (264 bytes security) (stored 0%)
adding: R/ (304 bytes security) (stored 0%)
adding: R/MADSEQ (264 bytes security) (deflated 41%)
adding: R/MADSEQ.rdb (264 bytes security) (deflated 30%)
adding: R/MADSEQ.rdx (264 bytes security) (stored 0%)
adding: rjags/ (304 bytes security) (stored 0%)
adding: rjags/FourMix.txt (264 bytes security) (deflated 50%)
adding: rjags/LOH.txt (264 bytes security) (deflated 59%)
adding: rjags/OneMix.txt (264 bytes security) (deflated 42%)
adding: rjags/TwoMixMonosomy.txt (264 bytes security) (deflated 51%)
adding: rjags/TwoMixTrisomy.txt (264 bytes security) (deflated 51%)