##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CATALYST
###
##############################################################################
##############################################################################


* checking for file ‘CATALYST/DESCRIPTION’ ... OK
* preparing ‘CATALYST’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘differential.Rmd’ using rmarkdown
2024-04-16 14:49:32.239 R[34199:449047876] XType: Using static font registry.

Quitting from lines 445-447 [runDR] (differential.Rmd)
Error: processing vignette 'differential.Rmd' failed with diagnostics:
function 'as_cholmod_sparse' not provided by package 'Matrix'
--- failed re-building ‘differential.Rmd’

--- re-building ‘preprocessing.Rmd’ using rmarkdown
--- finished re-building ‘preprocessing.Rmd’

SUMMARY: processing the following file failed:
  ‘differential.Rmd’

Error: Vignette re-building failed.
Execution halted