Long Tests report for BioC 3.18 - BUILD results for rhdf5 on palomino4

Back to Long Tests report for BioC 3.18

This page was generated on 2023-12-09 21:30:02 -0500 (Sat, 09 Dec 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.2 LTS)	x86_64	4.3.2 Patched (2023-11-13 r85521) -- "Eye Holes"	4688
palomino4	Windows Server 2022 Datacenter	x64	4.3.2 (2023-10-31 ucrt) -- "Eye Holes"	4439
lconway	macOS 12.7.1 Monterey	x86_64	4.3.2 Patched (2023-11-01 r85457) -- "Eye Holes"	4458
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

rhdf5 2.46.1 (landing page)
Mike Smith

Snapshot Date: 2023-12-09 09:55:01 -0500 (Sat, 09 Dec 2023)

git_url: https://git.bioconductor.org/packages/rhdf5

git_branch: RELEASE_3_18

git_last_commit: 27bab89

git_last_commit_date: 2023-11-29 10:28:25 -0500 (Wed, 29 Nov 2023)

nebbiolo2

Linux (Ubuntu 22.04.2 LTS) / x86_64

ERROR

palomino4

Windows Server 2022 Datacenter / x64

ERROR

lconway

macOS 12.7.1 Monterey / x86_64

ERROR

BUILD results for rhdf5 on palomino4

To the developers/maintainers of the rhdf5 package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: rhdf5

Version: 2.46.1

Command: chmod a+r rhdf5 -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data --no-build-vignettes --no-manual rhdf5

StartedAt: 2023-12-09 11:03:35 -0500 (Sat, 09 Dec 2023)

EndedAt: 2023-12-09 11:04:05 -0500 (Sat, 09 Dec 2023)

EllapsedTime: 30.4 seconds

RetCode: 0

Status: OK

PackageFile: rhdf5_2.46.1.tar.gz

PackageFileSize: 403.1 KiB

Command output

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### Running command:
###
###   chmod a+r rhdf5 -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data --no-build-vignettes --no-manual rhdf5
###
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* checking for file 'rhdf5/DESCRIPTION' ... OK
* preparing 'rhdf5':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup.win'
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building 'rhdf5_2.46.1.tar.gz'
Warning: file 'rhdf5/cleanup' did not have execute permissions: corrected
Warning: file 'rhdf5/configure' did not have execute permissions: corrected