############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL SCATE ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’ * installing *source* package ‘SCATE’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning message: Package 'SCATEData' is deprecated and will be removed from Bioconductor version 3.19 ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'SCATEData' is deprecated and will be removed from Bioconductor version 3.19 Warning: Package 'SCATE' is deprecated and will be removed from Bioconductor version 3.19 ** testing if installed package can be loaded from final location Warning: Package 'SCATEData' is deprecated and will be removed from Bioconductor version 3.19 Warning: Package 'SCATE' is deprecated and will be removed from Bioconductor version 3.19 ** testing if installed package keeps a record of temporary installation path * DONE (SCATE)