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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:EpiCompare.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings EpiCompare_1.3.4.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/EpiCompare.Rcheck’
* using R version 4.3.0 alpha (2023-04-03 r84154)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
    GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.2 LTS
* using session charset: UTF-8
* checking for file ‘EpiCompare/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘EpiCompare’ version ‘1.3.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘EpiCompare’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                             user system elapsed
plot_enrichment            39.375  2.571  50.584
plot_ChIPseeker_annotation 20.667  1.084  21.752
rebin_peaks                10.037  4.835   6.797
plot_corr                   9.401  2.060   9.756
plot_precision_recall       7.558  1.290   5.086
EpiCompare                  7.412  1.009   8.468
predict_precision_recall    6.656  1.328   3.910
liftover_grlist             4.627  1.340   6.704
plot_chromHMM               3.601  0.449   8.508
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   19.   │                   ├─base::withVisible(...)
   20.   │                   └─evaluate:::eval_with_user_handlers(expr, envir, enclos, user_handlers)
   21.   │                     └─base::eval(expr, envir, enclos)
   22.   │                       └─base::eval(expr, envir, enclos)
   23.   └─EpiCompare:::save_output(...)
   24.     └─ggplot2::ggsave(...)
   25.       ├─grid::grid.draw(plot)
   26.       └─ggplot2:::grid.draw.ggplot(plot)
   27.         ├─base::print(x)
   28.         └─ggplot2:::print.ggplot(x)
   29.           └─grid::grid.newpage()
  
  [ FAIL 1 | WARN 7 | SKIP 0 | PASS 92 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘EpiCompare.Rmd’ using ‘UTF-8’... OK
  ‘docker.Rmd’ using ‘UTF-8’... OK
  ‘example_report.Rmd’ using ‘UTF-8’... OK
 NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.17-bioc/meat/EpiCompare.Rcheck/00check.log’
for details.