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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL motifStack
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'motifStack' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'motifStack'
    finding HTML links ... done
    AAmotifAlignment                        html  
    DNAmotifAlignment                       html  
    DNAmotifToRNAmotif                      html  
    GeomMotif                               html  
    browseMotifs-shiny                      html  
    browseMotifs                            html  
    calF                                    html  
    calI                                    html  
    clusterMotifs                           html  
    colorset                                html  
    compare2profiles                        html  
    compareProfiles                         html  
    dpGlobal                                html  
    dpLocal                                 html  
    geom_motif                              html  
    getALLRscoreFromCounts                  html  
    getDistance                             html  
    getRankedUniqueMotifs                   html  
    getScore                                html  
    highlightCol                            html  
    importMatrix                            html  
    marker-class                            html  
    matalign                                html  
    mergeMotifs                             html  
    motifCircos                             html  
    motifCloud                              html  
    motifGrob                               html  
    motifHclust                             html  
    motifPiles                              html  
    motifSig-class                          html  
    motifSignature                          html  
    motifStack-package                      html  
    motifStack                              html  
    ouNode-class                            html  
    pcm-class                               html  
    pfm-class                               html  
    pfm2pwm                                 html  
    plotAffinityLogo                        html  
    plotMotifLogo                           html  
    plotMotifLogoA                          html  
    plotMotifLogoStack                      html  
    plotMotifLogoStackWithTree              html  
    plotMotifOverMotif                      html  
    plotMotifStackWithPhylog                html  
    plotMotifStackWithRadialPhylog          html  
    plotXaxis                               html  
    plotYaxis                               html  
    psam-class                              html  
    pssm-class                              html  
    readPCM                                 html  
    reorderUPGMAtree                        html  
    traceBackGlobal                         html  
    traceBackLocal                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (motifStack)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'AffyCompatible' is missing or broken
 done