############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL enrichTF ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'enrichTF' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'enrichTF' finding HTML links ... done EnrichStep-class html GenBackground html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/genBackground.html finding level-2 HTML links ... done GeneOntology html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/geneOntology.html MotifsInRegions html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/motifsInRegions.html Pipelines html RegionConnectTargetGene html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/regionConnectTargetGene.html SingleSampleReport html TFsEnrichInRegions html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/tfsEnrichInRegions.html TissueOpennessConserve html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/tissueOpennessConserve.html TissueOpennessSpecificity html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/tissueOpennessSpecificity.html UnzipAndMergeBed html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-enrichTF/00new/enrichTF/help/unzipAndMergeBed.html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (enrichTF) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'SNPhood' is missing or broken done