############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf OmicCircos.buildbin-libdir && mkdir OmicCircos.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=OmicCircos.buildbin-libdir OmicCircos_1.33.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'OmicCircos' ... ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'OmicCircos' finding HTML links ... done OmicCircos html TCGA.BC.cnv.2k.60 html TCGA.BC.fus html TCGA.BC.gene.exp.2k.60 html TCGA.BC.sample60 html TCGA.BC_Her2_cnv_exp html TCGA.PAM50_genefu_hg18 html UCSC.chr.colors html UCSC.hg18 html UCSC.hg18.chr html UCSC.hg19 html UCSC.hg19.chr html UCSC.mm10 html UCSC.mm10.chr html UCSC.mm9 html UCSC.mm9.chr html circos html segAnglePo-methods html segAnglePo html sim.circos html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'OmicCircos' as OmicCircos_1.33.0.zip * DONE (OmicCircos)