############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CellMapper ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'CellMapper' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'stats::sd' by 'S4Vectors::sd' when loading 'CellMapper' Warning: replacing previous import 'stats::var' by 'S4Vectors::var' when loading 'CellMapper' ** help *** installing help indices converting help for package 'CellMapper' finding HTML links ... done CMprep html CMsearch html CellMapperList-class html ExampleGeneLists html ReplicateManuscript html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'stats::sd' by 'S4Vectors::sd' when loading 'CellMapper' Warning: replacing previous import 'stats::var' by 'S4Vectors::var' when loading 'CellMapper' ** testing if installed package can be loaded from final location Warning: replacing previous import 'stats::sd' by 'S4Vectors::sd' when loading 'CellMapper' Warning: replacing previous import 'stats::var' by 'S4Vectors::var' when loading 'CellMapper' ** testing if installed package keeps a record of temporary installation path * DONE (CellMapper) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'RUVnormalize' is missing or broken done