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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ALDEx2
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'ALDEx2' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ALDEx2'
    finding HTML links ... done
    ALDEx2m-package                         html  
    aldex                                   html  
    aldex.clr-class                         html  
    aldex.clr.function-methods              html  
    aldex.corr                              html  
    aldex.effect                            html  
    aldex.glm                               html  
    aldex.glm.effect                        html  
    aldex.kw                                html  
    aldex.plotFeature                       html  
    aldex.set.mode                          html  
    aldex.ttest                             html  
    expectedDistance                        html  
    getDenom-method                         html  
    getDirichletInstances-method            html  
    getDirichletReplicate-method            html  
    getDirichletSample-method               html  
    getFeatureNames-method                  html  
    getFeatures-method                      html  
    getMonteCarloInstances-method           html  
    getMonteCarloReplicate-method           html  
    getMonteCarloSample-method              html  
    getReads-method                         html  
    getSampleIDs-method                     html  
    numConditions-method                    html  
    numFeatures-method                      html  
    numMCInstances-method                   html  
    plot.aldex                              html  
    selex                                   html  
    synth2                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ALDEx2)
Making 'packages.html' ... done