############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/wppi_1.2.0.tar.gz && rm -rf wppi.buildbin-libdir && mkdir wppi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wppi.buildbin-libdir wppi_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL wppi_1.2.0.zip && rm wppi_1.2.0.tar.gz wppi_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 419k 100 419k 0 0 858k 0 --:--:-- --:--:-- --:--:-- 860k install for i386 * installing *source* package 'wppi' ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading [2022-04-12 06:31:28] [INFO] [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`. [2022-04-12 06:31:28] [INFO] [OmnipathR] Welcome to OmnipathR! [2022-04-12 06:31:28] [TRACE] [OmnipathR] Cache locked: FALSE Note: wrong number of arguments to '/' ** help *** installing help indices converting help for package 'wppi' finding HTML links ... done common_neighbors html count_genes html filter_annot_with_network html functional_annot html graph_from_op html in_omnipath html prioritization_genes html process_annot html random_walk html score_candidate_genes_from_PPI html subgraph_op html weighted_adj html wppi html wppi_data html wppi_go_data html wppi_hpo_data html wppi_omnipath_data html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location [2022-04-12 06:31:34] [INFO] [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`. [2022-04-12 06:31:34] [INFO] [OmnipathR] Welcome to OmnipathR! [2022-04-12 06:31:34] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package can be loaded from final location [2022-04-12 06:31:38] [INFO] [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`. [2022-04-12 06:31:38] [INFO] [OmnipathR] Welcome to OmnipathR! [2022-04-12 06:31:38] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'wppi' ... ** testing if installed package can be loaded [2022-04-12 06:31:45] [INFO] [OmnipathR] Initialized cache: `C:\Users\biocbuild\AppData\Local\Cache\OmnipathR`. [2022-04-12 06:31:45] [INFO] [OmnipathR] Welcome to OmnipathR! [2022-04-12 06:31:45] [TRACE] [OmnipathR] Cache locked: FALSE * MD5 sums packaged installation of 'wppi' as wppi_1.2.0.zip * DONE (wppi) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'wppi' successfully unpacked and MD5 sums checked