############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/branchpointer_1.20.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.20.0.zip && rm branchpointer_1.20.0.tar.gz branchpointer_1.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 26 4716k 26 1240k 0 0 1193k 0 0:00:03 0:00:01 0:00:02 1193k 73 4716k 73 3451k 0 0 1689k 0 0:00:02 0:00:02 --:--:-- 1690k 100 4716k 100 4716k 0 0 1887k 0 0:00:02 0:00:02 --:--:-- 1887k install for i386 * installing *source* package 'branchpointer' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'branchpointer' finding HTML links ... done exonsToIntrons html getBranchpointSequence html getCanonical3SS html getExonDists html getPPT html getQueryLoc html gtfToExons html makeBranchpointWindowForExons html makeBranchpointWindowForSNP html plotBranchpointWindow html plotStructure html predictBranchpoints html predictionsToSummary html readQueryFile html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'branchpointer' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'branchpointer' as branchpointer_1.20.0.zip * DONE (branchpointer) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'branchpointer' successfully unpacked and MD5 sums checked