############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Sconify_1.14.0.tar.gz && rm -rf Sconify.buildbin-libdir && mkdir Sconify.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sconify.buildbin-libdir Sconify_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Sconify_1.14.0.zip && rm Sconify_1.14.0.tar.gz Sconify_1.14.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 6 3903k 6 255k 0 0 957k 0 0:00:04 --:--:-- 0:00:04 957k 59 3903k 59 2318k 0 0 1802k 0 0:00:02 0:00:01 0:00:01 1803k 100 3903k 100 3903k 0 0 2156k 0 0:00:01 0:00:01 --:--:-- 2156k install for i386 * installing *source* package 'Sconify' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Note: wrong number of arguments to '/' Note: wrong number of arguments to 'asinh' ** help *** installing help indices converting help for package 'Sconify' finding HTML links ... done AddTsne html FcsToTibble html Fnn html GetKnnDe html GetMarkerNames html Impute html ImputeTesting html LogTransformQ html MakeHist html MakeKnnList html MeaningOfLife html MultipleDonorStatistics html ParseMarkers html PostProcessing html ProcessMultipleFiles html QCorrectionThresholding html QuantNormalize html QuantNormalizeElements html RunStatistics html SconeValues html SplitFile html StringToNumbers html SubsampleAndTsne html TsneVis html bz.gmcsf.final html bz.gmcsf.final.norm.scale html exist html funct.markers html input.markers html markers html wand.combined html wand.final html wand.ideal.k html wand.il7 html wand.scone html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Sconify' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Sconify' as Sconify_1.14.0.zip * DONE (Sconify) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'Sconify' successfully unpacked and MD5 sums checked