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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RProtoBufLib_2.6.0.tar.gz && rm -rf RProtoBufLib.buildbin-libdir && mkdir RProtoBufLib.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RProtoBufLib.buildbin-libdir RProtoBufLib_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RProtoBufLib_2.6.0.zip && rm RProtoBufLib_2.6.0.tar.gz RProtoBufLib_2.6.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  5 4622k    5  263k    0     0   613k      0  0:00:07 --:--:--  0:00:07  613k
100 4622k  100 4622k    0     0  5118k      0 --:--:-- --:--:-- --:--:-- 5119k

install for i386

* installing *source* package 'RProtoBufLib' ...
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
"C:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386/Rscript.exe" "../tools/downloadlibs.R" 3.13.0
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.13.0/include    -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c GatingSet_pb_lib/GatingSet.pb.cc -o GatingSet_pb_lib/GatingSet.pb.o
mkdir -p "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
cp -r ../windows/protobuf-3.13.0/include/google "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
mkdir -p "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/i386"
cp  ../windows/protobuf-3.13.0/lib/i386/libprotobuf.a "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/i386/libprotobuf.a"
cp GatingSet_pb_lib/GatingSet.pb.o "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/i386/GatingSet.pb.o"
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.13.0/include    -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c dummy.cpp -o dummy.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o RProtoBufLib.dll tmp.def dummy.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RProtoBufLib'
    finding HTML links ... done
    LdFlags                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RProtoBufLib' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
"C:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64/Rscript.exe" "../tools/downloadlibs.R" 3.13.0
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.13.0/include    -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c GatingSet_pb_lib/GatingSet.pb.cc -o GatingSet_pb_lib/GatingSet.pb.o
mkdir -p "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/include"
cp -r ../windows/protobuf-3.13.0/include/google "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/include"
mkdir -p "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/lib/x64"
cp  ../windows/protobuf-3.13.0/lib/x64/libprotobuf.a "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/lib/x64/libprotobuf.a"
cp GatingSet_pb_lib/GatingSet.pb.o "C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/lib/x64/GatingSet.pb.o"
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.13.0/include    -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c dummy.cpp -o dummy.o
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o RProtoBufLib.dll tmp.def dummy.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RProtoBufLib.buildbin-libdir/RProtoBufLib/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RProtoBufLib' as RProtoBufLib_2.6.0.zip
* DONE (RProtoBufLib)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'RProtoBufLib' successfully unpacked and MD5 sums checked