############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:EBImage.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings EBImage_4.36.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.14-bioc/meat/EBImage.Rcheck’ * using R version 4.1.3 (2022-03-10) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘EBImage/DESCRIPTION’ ... OK * this is package ‘EBImage’ version ‘4.36.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘EBImage’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed EBImage 3.584 0.204 9.154 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘test.R’ Comparing ‘test.Rout’ to ‘test.Rout.save’ ...509c509 < checking 'computeFeatures' .................... PASS (0e0499b50d90be9d) 3988836 --- > checking 'computeFeatures' .................... PASS (c1ff2e62e7bb8eee) 3989786 586c586 < checking 'computeFeatures' .................... PASS (10c741c6898b4b96) 746878.2 --- > checking 'computeFeatures' .................... PASS (a33c53edd3cf8a46) 746878.2 665c665 < checking 'computeFeatures' .................... PASS (6f8fccf9be44bfef) 416109350 --- > checking 'computeFeatures' .................... PASS (1bf064e6a11f2410) 416164140 671,672c671,672 < checking 'gblur' .............................. PASS (bd9e6638aeecda72) 1037581 < checking 'filter2' ............................ PASS (448257eb6e58efb1) 26149148 --- > checking 'gblur' .............................. PASS (9224b720f9d00006) 1037581 > checking 'filter2' ............................ PASS (637287a5df76a79d) 26149148 743c743 < checking 'computeFeatures' .................... PASS (157a5f036e189a0a) 749353.1 --- > checking 'computeFeatures' .................... PASS (151a0d98d309d0b1) 749353.1 821c821 < checking 'computeFeatures' .................... PASS (cddeb53183f0a518) 734993.9 --- > checking 'computeFeatures' .................... PASS (53798e843cdbfa9f) 734993.9 899c899 < checking 'computeFeatures' .................... PASS (cddeb53183f0a518) 734993.9 --- > checking 'computeFeatures' .................... PASS (53798e843cdbfa9f) 734993.9 OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.14-bioc/meat/EBImage.Rcheck/00check.log’ for details.