############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf SSPA.buildbin-libdir && mkdir SSPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SSPA.buildbin-libdir SSPA_2.32.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'SSPA' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c SSPA_init.c -o SSPA_init.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c massdistc.c -o massdistc.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c nncgc.c -o nncgc.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o SSPA.dll tmp.def SSPA_init.o massdistc.o nncgc.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/SSPA.buildbin-libdir/00LOCK-SSPA/00new/SSPA/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SSPA' finding HTML links ... done Nutrigenomics html cornerLcurve html cornerScurve html dbitri html deconvolution html deepSAGE html defineEffectSizeRange html findroot html midpoint html nncg html pbitri html picardplot html pilotData html predictpower html qbitri html rbitri html regularization html sampleSize html show-methods html simdat html simpson html standardform html tikhonov html trapezoidal html trimbin html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'SSPA' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package can be loaded from final location Warning: Package 'SSPA' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SSPA' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c SSPA_init.c -o SSPA_init.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c massdistc.c -o massdistc.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c nncgc.c -o nncgc.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o SSPA.dll tmp.def SSPA_init.o massdistc.o nncgc.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/SSPA.buildbin-libdir/SSPA/libs/x64 ** testing if installed package can be loaded Warning: Package 'SSPA' is deprecated and will be removed from Bioconductor version 3.14 * MD5 sums packaged installation of 'SSPA' as SSPA_2.32.1.zip * DONE (SSPA)