Biobase 2.0.1
Biocore Team c/o BioC user list
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/Biobase | | Last Changed Rev: 31548 / Revision: 33132 | | Last Changed Date: 2008-05-07 20:42:32 -0700 (Wed, 07 May 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for file 'Biobase/DESCRIPTION' ... OK
* preparing 'Biobase':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.2-bioc/tmpdir/Rinst386807141
---------- Making package Biobase ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making Rinit.d from Rinit.c
making anyMissing.d from anyMissing.c
making envir.d from envir.c
making matchpt.d from matchpt.c
making rowMedians.d from rowMedians.c
making sublist_extract.d from sublist_extract.c
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c Rinit.c -o Rinit.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c anyMissing.c -o anyMissing.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c envir.c -o envir.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c matchpt.c -o matchpt.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c rowMedians.c -o rowMedians.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c sublist_extract.c -o sublist_extract.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.2-bioc/R/include -i Biobase_res.rc -o Biobase_res.o
gcc -std=gnu99 -shared -s -o Biobase.dll Biobase.def Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o Biobase_res.o -Le:/biocbld/bbs-2.2-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
preparing package Biobase for lazy loading
Loading required package: tools
installing man source files
installing indices
Loading required package: methods
not zipping data
installing help
>>> Building/Updating help pages for package 'Biobase'
Formats: text html latex example chm
Aggregate text html latex example chm
Biobase-package text html latex chm
ScalarObject-class text html latex example chm
abstract text html latex chm
addVig2Menu text html latex example chm
annotatedDataFrameFrom-methods text html latex chm
annotation text html latex chm
anyMissing text html latex example chm
assayData text html latex chm
biocReposList text html latex example chm
cache text html latex example chm
channel text html latex example chm
channelNames text html latex example chm
class.AnnotatedDataFrame text html latex example chm
class.AssayData text html latex chm
class.ExpressionSet text html latex example chm
class.MIAME text html latex chm
class.MultiSet text html latex example chm
class.NChannelSet text html latex example chm
class.SnpSet text html latex chm
class.Versioned text html latex example chm
class.VersionedBiobase text html latex example chm
class.Versions text html latex example chm
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class.aggregator text html latex chm
class.characterORmiame text html latex chm
class.container text html latex example chm
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data.aaMap text html latex example chm
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listLen text html latex example chm
makeDataPackage text html latex example chm
matchpt text html latex example chm
multiassign text html latex example chm
note text html latex example chm
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openPDF text html latex example chm
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package.version text html latex example chm
phenoData text html latex chm
read.AnnotatedDataFrame text html latex example chm
read.MIAME text html latex example chm
readExpressionSet text html latex example chm
reverseSplit text html latex example chm
rowMedians text html latex example chm
rowQ text html latex example chm
selectChannels text html latex example chm
selectSome text html latex example chm
storageMode text html latex chm
strbreak text html latex example chm
subListExtract text html latex example chm
testBioCConnection text html latex example chm
updateObject text html latex example chm
updateOldESet text html latex example chm
userQuery text html latex chm
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Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\Biobase\chm\Biobase.chm
Compile time: 0 minutes, 2 seconds
80 Topics
697 Local links
6 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\Biobase\chm\Biobase.chm, 127,520 bytes
Compression decreased file by 265,723 bytes.
adding MD5 sums
* DONE (Biobase)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'Biobase_2.0.1.tar.gz'