| Back to the "Multiple platform build/check report" |
This page was generated on 2014-04-04 17:29:04 -0700 (Fri, 04 Apr 2014).
| Package 118/181 | Hostname | OS / Arch | BUILD | CHECK | BUILD BIN | ||||
| miRNATarget 1.1.2 Y-h. Taguchi
| zin1 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | |||||
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | [ OK ] | OK | |||||
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK |
| Package: miRNATarget |
| Version: 1.1.2 |
| Command: rm -rf miRNATarget.buildbin-libdir && mkdir miRNATarget.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=miRNATarget.buildbin-libdir miRNATarget_1.1.2.tar.gz >miRNATarget-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=miRNATarget.buildbin-libdir --install="check:miRNATarget-install.out" --force-multiarch --no-vignettes --timings miRNATarget_1.1.2.tar.gz && mv miRNATarget.buildbin-libdir/* miRNATarget.Rcheck/ && rmdir miRNATarget.buildbin-libdir |
| StartedAt: 2014-04-04 12:11:10 -0700 (Fri, 04 Apr 2014) |
| EndedAt: 2014-04-04 12:13:36 -0700 (Fri, 04 Apr 2014) |
| EllapsedTime: 146.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: miRNATarget.Rcheck |
| Warnings: 0 |
* using log directory 'D:/biocbld/bbs-2.13-data-experiment/meat/miRNATarget.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'miRNATarget/DESCRIPTION' ... OK
* this is package 'miRNATarget' version '1.1.2'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'miRNATarget' can be installed ... OK
* checking installed package size ... NOTE
installed size is 23.1Mb
sub-directories of 1Mb or more:
data 22.8Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [23s] OK
** running examples for arch 'x64' ... [21s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
NOTE: There was 1 note.
See
'D:/biocbld/bbs-2.13-data-experiment/meat/miRNATarget.Rcheck/00check.log'
for details.
miRNATarget.Rcheck/00install.out:
install for i386 * installing *source* package 'miRNATarget' ... ** data ** inst ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded install for x64 * installing *source* package 'miRNATarget' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'miRNATarget' as miRNATarget_1.1.2.zip * DONE (miRNATarget)
miRNATarget.Rcheck/examples_i386/miRNATarget-Ex.timings:
| name | user | system | elapsed | |
| HS_conv_id | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_hc_g110 | 0.02 | 0.00 | 0.02 | |
| HS_refseq_to_affy_hg_focus | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_hg_u133_plus_2 | 0.17 | 0.00 | 0.17 | |
| HS_refseq_to_affy_hg_u133a | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_affy_hg_u133a_2 | 0.08 | 0.01 | 0.10 | |
| HS_refseq_to_affy_hg_u133b | 0.04 | 0.00 | 0.04 | |
| HS_refseq_to_affy_hg_u95a | 0.05 | 0.02 | 0.06 | |
| HS_refseq_to_affy_hg_u95av2 | 0.05 | 0.00 | 0.04 | |
| HS_refseq_to_affy_hg_u95b | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_hg_u95c | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_hg_u95d | 0.02 | 0.00 | 0.01 | |
| HS_refseq_to_affy_hg_u95e | 0.02 | 0.00 | 0.01 | |
| HS_refseq_to_affy_huex_1_0_st_v2 | 1.83 | 0.04 | 1.86 | |
| HS_refseq_to_affy_hugene_1_0_st_v1 | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_affy_hugenefl | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_u133_x3p | 0.14 | 0.01 | 0.16 | |
| HS_refseq_to_agilent_cgh_44b | 0.02 | 0.02 | 0.03 | |
| HS_refseq_to_agilent_wholegenome | 0.1 | 0.0 | 0.1 | |
| HS_refseq_to_canonical_transcript_stable_id | 0.09 | 0.01 | 0.11 | |
| HS_refseq_to_ccds | 0.07 | 0.00 | 0.08 | |
| HS_refseq_to_codelink | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_embl | 0.43 | 0.00 | 0.42 | |
| HS_refseq_to_ensembl_gene_id | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_ensembl_peptide_id | 0.12 | 0.00 | 0.12 | |
| HS_refseq_to_ensembl_transcript_id | 0.14 | 0.02 | 0.16 | |
| HS_refseq_to_entrezgene | 0.13 | 0.00 | 0.13 | |
| HS_refseq_to_hgnc_id | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_hgnc_symbol | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_hgnc_transcript_name | 0.14 | 0.01 | 0.15 | |
| HS_refseq_to_illumina_humanht_12 | 0.14 | 0.02 | 0.16 | |
| HS_refseq_to_illumina_humanwg_6_v1 | 0.07 | 0.00 | 0.08 | |
| HS_refseq_to_illumina_humanwg_6_v2 | 0.08 | 0.00 | 0.08 | |
| HS_refseq_to_illumina_humanwg_6_v3 | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_interpro | 0.19 | 0.00 | 0.18 | |
| HS_refseq_to_ipi | 0.15 | 0.00 | 0.16 | |
| HS_refseq_to_merops | 0.02 | 0.01 | 0.04 | |
| HS_refseq_to_pdb | 0.06 | 0.00 | 0.06 | |
| HS_refseq_to_pfam | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_phalanx_onearray | 0.1 | 0.0 | 0.1 | |
| HS_refseq_to_protein_id | 0.39 | 0.00 | 0.70 | |
| HS_refseq_to_refseq_dna | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_refseq_genomic | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_refseq_peptide | 0.19 | 0.00 | 0.19 | |
| HS_refseq_to_rfam | 0.04 | 0.00 | 0.03 | |
| HS_refseq_to_rfam_gene_name | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_rfam_transcript_name | 0.02 | 0.02 | 0.03 | |
| HS_refseq_to_smart | 0.08 | 0.01 | 0.10 | |
| HS_refseq_to_tigrfam | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_ucsc | 0.12 | 0.02 | 0.14 | |
| HS_refseq_to_unigene | 0.15 | 0.00 | 0.16 | |
| HS_refseq_to_uniprot_genename | 0.14 | 0.00 | 0.14 | |
| HS_refseq_to_wikigene_name | 0.12 | 0.00 | 0.13 | |
| MM_conv_id | 0.03 | 0.00 | 0.04 | |
| MM_refseq_to_affy_mg_u74a | 0.05 | 0.00 | 0.05 | |
| MM_refseq_to_affy_mg_u74av2 | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_affy_mg_u74b | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_affy_mg_u74bv2 | 0.01 | 0.00 | 0.01 | |
| MM_refseq_to_affy_mg_u74c | 0.01 | 0.00 | 0.02 | |
| MM_refseq_to_affy_mg_u74cv2 | 0.00 | 0.01 | 0.01 | |
| MM_refseq_to_affy_moe430a | 0.06 | 0.00 | 0.06 | |
| MM_refseq_to_affy_moe430b | 0.01 | 0.00 | 0.01 | |
| MM_refseq_to_affy_moex_1_0_st_v1 | 0.89 | 0.00 | 0.89 | |
| MM_refseq_to_affy_mogene_1_0_st_v1 | 0.11 | 0.00 | 0.11 | |
| MM_refseq_to_affy_mouse430_2 | 0.13 | 0.00 | 0.13 | |
| MM_refseq_to_affy_mouse430a_2 | 0.07 | 0.00 | 0.06 | |
| MM_refseq_to_affy_mu11ksuba | 0.02 | 0.00 | 0.02 | |
| MM_refseq_to_affy_mu11ksubb | 0.02 | 0.00 | 0.02 | |
| MM_refseq_to_agilent_wholegenome | 0.06 | 0.02 | 0.08 | |
| MM_refseq_to_canonical_transcript_stable_id | 0.07 | 0.00 | 0.08 | |
| MM_refseq_to_ccds | 0.06 | 0.00 | 0.07 | |
| MM_refseq_to_codelink | 0.08 | 0.00 | 0.07 | |
| MM_refseq_to_embl | 0.26 | 0.01 | 0.28 | |
| MM_refseq_to_ensembl_gene_id | 0.09 | 0.00 | 0.09 | |
| MM_refseq_to_ensembl_peptide_id | 0.09 | 0.00 | 0.09 | |
| MM_refseq_to_ensembl_transcript_id | 0.08 | 0.00 | 0.08 | |
| MM_refseq_to_entrezgene | 0.06 | 0.02 | 0.08 | |
| MM_refseq_to_fantom | 0.09 | 0.00 | 0.09 | |
| MM_refseq_to_illumina_mousewg_6_v1 | 0.11 | 0.00 | 0.10 | |
| MM_refseq_to_illumina_mousewg_6_v2 | 0.09 | 0.02 | 0.11 | |
| MM_refseq_to_interpro | 0.17 | 0.00 | 0.18 | |
| MM_refseq_to_ipi | 0.11 | 0.00 | 0.11 | |
| MM_refseq_to_merops | 0.02 | 0.00 | 0.01 | |
| MM_refseq_to_mgi_id | 0.10 | 0.00 | 0.09 | |
| MM_refseq_to_mgi_symbol | 0.08 | 0.00 | 0.07 | |
| MM_refseq_to_mgi_transcript_name | 0.09 | 0.00 | 0.09 | |
| MM_refseq_to_pdb | 0.04 | 0.00 | 0.05 | |
| MM_refseq_to_pfam | 0.09 | 0.00 | 0.09 | |
| MM_refseq_to_phalanx_onearray | 0.10 | 0.00 | 0.09 | |
| MM_refseq_to_protein_id | 0.27 | 0.01 | 0.28 | |
| MM_refseq_to_refseq_dna | 0.06 | 0.02 | 0.08 | |
| MM_refseq_to_refseq_peptide | 0.11 | 0.00 | 0.11 | |
| MM_refseq_to_rfam | 0.05 | 0.00 | 0.05 | |
| MM_refseq_to_rfam_gene_name | 0.06 | 0.00 | 0.07 | |
| MM_refseq_to_rfam_transcript_name | 0.03 | 0.00 | 0.04 | |
| MM_refseq_to_smart | 0.11 | 0.00 | 0.11 | |
| MM_refseq_to_tigrfam | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_ucsc | 0.08 | 0.01 | 0.10 | |
| MM_refseq_to_unigene | 0.10 | 0.00 | 0.11 | |
| MM_refseq_to_uniprot_genename | 0.14 | 0.00 | 0.14 | |
| MM_refseq_to_wikigene_name | 0.11 | 0.00 | 0.16 | |
| TBL2 | 1.61 | 0.03 | 1.64 | |
| TBL2_HS | 3.51 | 0.22 | 3.73 | |
| TBL2_MM | 1.67 | 0.05 | 1.71 | |
| conv_id | 0.02 | 0.00 | 0.02 | |
| id_conv | 0.07 | 0.00 | 0.08 | |
miRNATarget.Rcheck/examples_x64/miRNATarget-Ex.timings:
| name | user | system | elapsed | |
| HS_conv_id | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_hc_g110 | 0.02 | 0.00 | 0.01 | |
| HS_refseq_to_affy_hg_focus | 0.05 | 0.00 | 0.05 | |
| HS_refseq_to_affy_hg_u133_plus_2 | 0.14 | 0.02 | 0.16 | |
| HS_refseq_to_affy_hg_u133a | 0.08 | 0.00 | 0.08 | |
| HS_refseq_to_affy_hg_u133a_2 | 0.13 | 0.01 | 0.14 | |
| HS_refseq_to_affy_hg_u133b | 0.04 | 0.00 | 0.05 | |
| HS_refseq_to_affy_hg_u95a | 0.06 | 0.00 | 0.06 | |
| HS_refseq_to_affy_hg_u95av2 | 0.06 | 0.00 | 0.06 | |
| HS_refseq_to_affy_hg_u95b | 0.05 | 0.00 | 0.05 | |
| HS_refseq_to_affy_hg_u95c | 0.05 | 0.00 | 0.04 | |
| HS_refseq_to_affy_hg_u95d | 0.02 | 0.00 | 0.02 | |
| HS_refseq_to_affy_hg_u95e | 0.02 | 0.02 | 0.03 | |
| HS_refseq_to_affy_huex_1_0_st_v2 | 2.12 | 0.01 | 2.14 | |
| HS_refseq_to_affy_hugene_1_0_st_v1 | 0.08 | 0.00 | 0.08 | |
| HS_refseq_to_affy_hugenefl | 0.03 | 0.00 | 0.03 | |
| HS_refseq_to_affy_u133_x3p | 0.14 | 0.00 | 0.14 | |
| HS_refseq_to_agilent_cgh_44b | 0.04 | 0.02 | 0.05 | |
| HS_refseq_to_agilent_wholegenome | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_canonical_transcript_stable_id | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_ccds | 0.07 | 0.00 | 0.06 | |
| HS_refseq_to_codelink | 0.10 | 0.00 | 0.09 | |
| HS_refseq_to_embl | 0.45 | 0.00 | 0.45 | |
| HS_refseq_to_ensembl_gene_id | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_ensembl_peptide_id | 0.12 | 0.00 | 0.13 | |
| HS_refseq_to_ensembl_transcript_id | 0.13 | 0.01 | 0.14 | |
| HS_refseq_to_entrezgene | 0.1 | 0.0 | 0.1 | |
| HS_refseq_to_hgnc_id | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_hgnc_symbol | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_hgnc_transcript_name | 0.14 | 0.00 | 0.14 | |
| HS_refseq_to_illumina_humanht_12 | 0.08 | 0.02 | 0.10 | |
| HS_refseq_to_illumina_humanwg_6_v1 | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_illumina_humanwg_6_v2 | 0.07 | 0.00 | 0.08 | |
| HS_refseq_to_illumina_humanwg_6_v3 | 0.08 | 0.02 | 0.09 | |
| HS_refseq_to_interpro | 0.19 | 0.00 | 0.18 | |
| HS_refseq_to_ipi | 0.16 | 0.00 | 0.16 | |
| HS_refseq_to_merops | 0 | 0 | 0 | |
| HS_refseq_to_pdb | 0.07 | 0.00 | 0.07 | |
| HS_refseq_to_pfam | 0.08 | 0.00 | 0.07 | |
| HS_refseq_to_phalanx_onearray | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_protein_id | 0.38 | 0.00 | 0.37 | |
| HS_refseq_to_refseq_dna | 0.22 | 0.00 | 0.22 | |
| HS_refseq_to_refseq_genomic | 0.00 | 0.01 | 0.02 | |
| HS_refseq_to_refseq_peptide | 0.09 | 0.00 | 0.09 | |
| HS_refseq_to_rfam | 0 | 0 | 0 | |
| HS_refseq_to_rfam_gene_name | 0.02 | 0.00 | 0.01 | |
| HS_refseq_to_rfam_transcript_name | 0.01 | 0.00 | 0.02 | |
| HS_refseq_to_smart | 0.05 | 0.00 | 0.04 | |
| HS_refseq_to_tigrfam | 0.02 | 0.00 | 0.02 | |
| HS_refseq_to_ucsc | 0.08 | 0.02 | 0.09 | |
| HS_refseq_to_unigene | 0.11 | 0.00 | 0.11 | |
| HS_refseq_to_uniprot_genename | 0.12 | 0.00 | 0.12 | |
| HS_refseq_to_wikigene_name | 0.17 | 0.00 | 0.17 | |
| MM_conv_id | 0.02 | 0.00 | 0.02 | |
| MM_refseq_to_affy_mg_u74a | 0.02 | 0.01 | 0.03 | |
| MM_refseq_to_affy_mg_u74av2 | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_affy_mg_u74b | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_affy_mg_u74bv2 | 0.05 | 0.00 | 0.05 | |
| MM_refseq_to_affy_mg_u74c | 0 | 0 | 0 | |
| MM_refseq_to_affy_mg_u74cv2 | 0.02 | 0.00 | 0.02 | |
| MM_refseq_to_affy_moe430a | 0.04 | 0.02 | 0.07 | |
| MM_refseq_to_affy_moe430b | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_affy_moex_1_0_st_v1 | 0.73 | 0.01 | 0.75 | |
| MM_refseq_to_affy_mogene_1_0_st_v1 | 0.07 | 0.00 | 0.07 | |
| MM_refseq_to_affy_mouse430_2 | 0.08 | 0.00 | 0.08 | |
| MM_refseq_to_affy_mouse430a_2 | 0.06 | 0.00 | 0.06 | |
| MM_refseq_to_affy_mu11ksuba | 0.02 | 0.00 | 0.01 | |
| MM_refseq_to_affy_mu11ksubb | 0.01 | 0.00 | 0.01 | |
| MM_refseq_to_agilent_wholegenome | 0.09 | 0.02 | 0.11 | |
| MM_refseq_to_canonical_transcript_stable_id | 0.10 | 0.00 | 0.09 | |
| MM_refseq_to_ccds | 0.04 | 0.00 | 0.05 | |
| MM_refseq_to_codelink | 0.04 | 0.00 | 0.05 | |
| MM_refseq_to_embl | 0.30 | 0.00 | 0.29 | |
| MM_refseq_to_ensembl_gene_id | 0.19 | 0.00 | 0.19 | |
| MM_refseq_to_ensembl_peptide_id | 0.07 | 0.00 | 0.08 | |
| MM_refseq_to_ensembl_transcript_id | 0.08 | 0.00 | 0.08 | |
| MM_refseq_to_entrezgene | 0.07 | 0.00 | 0.07 | |
| MM_refseq_to_fantom | 0.07 | 0.00 | 0.07 | |
| MM_refseq_to_illumina_mousewg_6_v1 | 0.08 | 0.00 | 0.08 | |
| MM_refseq_to_illumina_mousewg_6_v2 | 0.1 | 0.0 | 0.1 | |
| MM_refseq_to_interpro | 0.13 | 0.00 | 0.13 | |
| MM_refseq_to_ipi | 0.1 | 0.0 | 0.1 | |
| MM_refseq_to_merops | 0.02 | 0.00 | 0.02 | |
| MM_refseq_to_mgi_id | 0.07 | 0.00 | 0.07 | |
| MM_refseq_to_mgi_symbol | 0.06 | 0.00 | 0.06 | |
| MM_refseq_to_mgi_transcript_name | 0.06 | 0.00 | 0.06 | |
| MM_refseq_to_pdb | 0 | 0 | 0 | |
| MM_refseq_to_pfam | 0.08 | 0.00 | 0.08 | |
| MM_refseq_to_phalanx_onearray | 0.06 | 0.02 | 0.08 | |
| MM_refseq_to_protein_id | 0.25 | 0.00 | 0.25 | |
| MM_refseq_to_refseq_dna | 0.06 | 0.00 | 0.06 | |
| MM_refseq_to_refseq_peptide | 0.10 | 0.00 | 0.09 | |
| MM_refseq_to_rfam | 0 | 0 | 0 | |
| MM_refseq_to_rfam_gene_name | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_rfam_transcript_name | 0.03 | 0.00 | 0.03 | |
| MM_refseq_to_smart | 0.05 | 0.00 | 0.04 | |
| MM_refseq_to_tigrfam | 0.00 | 0.02 | 0.02 | |
| MM_refseq_to_ucsc | 0.05 | 0.01 | 0.06 | |
| MM_refseq_to_unigene | 0.11 | 0.00 | 0.11 | |
| MM_refseq_to_uniprot_genename | 0.12 | 0.00 | 0.13 | |
| MM_refseq_to_wikigene_name | 0.06 | 0.00 | 0.06 | |
| TBL2 | 1.56 | 0.05 | 1.61 | |
| TBL2_HS | 2.94 | 0.09 | 3.04 | |
| TBL2_MM | 1.46 | 0.10 | 1.55 | |
| conv_id | 0 | 0 | 0 | |
| id_conv | 0.06 | 0.00 | 0.06 | |