Back to the "Multiple platform build/check report"

Package 110/234HostnameOSArchBUILDCHECKBUILD BIN
KEGGSOAP 1.12.0
Robert Gentleman
Last Changed Date: 2007-10-02 17:41:09 -0700
Last Changed Rev: 27709
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) x64  OK  WARNINGS  OK 
pitt Mac OS X (10.4.10) i386  OK  OK  OK 
Package: KEGGSOAP
Version: 1.12.0
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check KEGGSOAP_1.12.0.tar.gz
RetCode: 0
Time: 158.3 seconds
Status: OK
CheckDir: KEGGSOAP.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/KEGGSOAP.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'KEGGSOAP/DESCRIPTION' ... OK
* this is package 'KEGGSOAP' version '1.12.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'KEGGSOAP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating KEGGSOAP-Ex.R ... OK
* checking examples ... OK
* creating KEGGSOAP-manual.tex ... OK
* checking KEGGSOAP-manual.tex ... OK

KEGGSOAP.Rcheck/00install.out:

* Installing *source* package 'KEGGSOAP' ...
** R
** preparing package for lazy loading
Loading required package: XML
Loading required package: SSOAP
Loading required package: RCurl
** help
 >>> Building/Updating help pages for package 'KEGGSOAP'
     Formats: text html latex example 
  KEGGserver                        text    html    latex
  bget                              text    html    latex   example
  get.genes.by.motifs               text    html    latex   example
  get.genes.by.organism             text    html    latex   example
  get.genes.by.pathway              text    html    latex   example
  get.motifs.by.gene                text    html    latex   example
  get.paralogs.by.gene              text    html    latex   example
  get.pathways.by.genes             text    html    latex   example
  getBestNeighbors                  text    html    latex   example
  list.organisms                    text    html    latex   example
  mark.pathway.by.objects           text    html    latex   example
  search.compounds.by.name          text    html    latex   example
  search.glycans.by.name            text    html    latex   example
** building package indices ...
* DONE (KEGGSOAP)