Package: GLAD

Version: 1.12.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build GLAD

RetCode: 0

Time: 45.0 seconds

Status: OK

PackageFile: GLAD_1.12.0.tar.gz

* checking for file 'GLAD/DESCRIPTION' ... OK
* preparing 'GLAD':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.1-bioc/tmpdir/Rinst77278228


---------- Making package GLAD ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making distance.d from distance.c
making glad-function.d from glad-function.c
making hclust.d from hclust.c
making laws.d from laws.c
making glad.d from glad.cpp
gcc-sjlj  -std=gnu99  -Ie:/biocbld/bbs-2.1-bioc/R/include    -Wall -O3  -c distance.c -o distance.o
gcc-sjlj  -std=gnu99  -Ie:/biocbld/bbs-2.1-bioc/R/include    -Wall -O3  -c glad-function.c -o glad-function.o
gcc-sjlj  -std=gnu99  -Ie:/biocbld/bbs-2.1-bioc/R/include    -Wall -O3  -c hclust.c -o hclust.o
gcc-sjlj  -std=gnu99  -Ie:/biocbld/bbs-2.1-bioc/R/include    -Wall -O3  -c laws.c -o laws.o
g++-sjlj   -Ie:/biocbld/bbs-2.1-bioc/R/include    -Wall -O2  -c glad.cpp -o glad.o
glad.cpp: In function 'void detectOutliers(double*, int*, int*, int*, int*, int*, double*, int*)':
glad.cpp:112: warning: comparison between signed and unsigned integer expressions
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.1-bioc/R/include  -i GLAD_res.rc -o GLAD_res.o
g++-sjlj   -shared -s  -o GLAD.dll GLAD.def distance.o glad-function.o hclust.o laws.o glad.o GLAD_res.o  -Le:/biocbld/bbs-2.1-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing demos
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'GLAD'
     Formats: text html latex example chm 
  ChrNumeric                        text    html    latex   example chm
  ColorBar                          text    html    latex   example chm
  GLAD-internal                     text    html    latex           chm
  arrayCGH                          text    html    latex   example chm
  arrayPersp                        text    html    latex   example chm
  arrayPlot                         text    html    latex   example chm
  as.data.frame.profileCGH          text    html    latex   example chm
  as.profileCGH                     text    html    latex   example chm
  bladder                           text    html    latex   example chm
  cytoband                          text    html    latex   example chm
  daglad                            text    html    latex   example chm
  glad                              text    html    latex   example chm
  hclust                            text    html    latex   example chm
  kernel                            text    html    latex           chm
  myPalette                         text    html    latex   example chm
  plotProfile                       text    html    latex   example chm
  profileCGH                        text    html    latex   example chm
  snijders                          text    html    latex   example chm
  tkdaglad                          text    html    latex   example chm
  veltman                           text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.1-bioc\meat\GLAD\chm\GLAD.chm





Compile time: 0 minutes, 1 second

21	Topics

90	Local links

14	Internet links

1	Graphic





Created e:\biocbld\bbs-2.1-bioc\meat\GLAD\chm\GLAD.chm, 53,069 bytes

Compression decreased file by 56,317 bytes.

  preparing package GLAD for lazy loading
Loading required package: aws
Loading required package: tcltk
Loading Tcl/Tk interface ... done
  adding MD5 sums

* DONE (GLAD)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'GLAD_1.12.0.tar.gz'