Package Download_score xtropicalisprobe 15 TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts 151 porcine.db 21 BSgenome.Scerevisiae.UCSC.sacCer2 185 drosgenome1cdf 17 pd.hg.u95av2 50 hom.Hs.inp.db 14 pd.canine.2 22 mouseCHRLOC 12 pd.ecoli 24 hgu95b.db 22 BSgenome.Drerio.UCSC.danRer7.masked 16 BSgenome.Drerio.UCSC.danRer7 219 illuminaHumanv2.db 63 hgu219cdf 45 TxDb.Scerevisiae.UCSC.sacCer3.sgdGene 90 pd.porgene.1.1.st 23 FDb.InfiniumMethylation.hg19 1346 BSgenome.Tgondii.ToxoDB.7.0 20 pd.mapping50k.xba240 143 hthgu133a.db 79 lumiMouseAll.db 18 human.db0 75 mogene10sttranscriptcluster.db 84 pd.2006.07.18.hg18.refseq.promoter 24 BSgenome.Btaurus.UCSC.bosTau3 37 barley1cdf 18 mgug4104a.db 20 drosgenome1probe 18 TxDb.Mmusculus.UCSC.mm9.knownGene 613 pd.medicago 21 gahgu133bprobe 3 pd.mapping50k.hind240 123 OperonHumanV3.db 18 Rattus.norvegicus 61 pd.tomato 22 medicagocdf 18 BSgenome.Athaliana.TAIR.TAIR9 70 mgu74ccdf 16 TxDb.Rnorvegicus.UCSC.rn4.ensGene 282 org.Rn.eg.db 1556 hthgu133afrmavecs 16 HuO22.db 17 gahgu95eprobe 3 BSgenome.Scerevisiae.UCSC.sacCer3 209 pd.hugene.1.0.st.v1 223 org.Sco.eg.db 4 pd.bovgene.1.0.st 30 agprobe 18 bovineprobe 19 pd.mg.u74bv2 22 hugene10stv1probe 29 celeganscdf 18 ecolicdf 53 rae230a.db 72 hom.Ce.inp.db 5 pd.hg.u133a.2 42 hcg110cdf 16 TxDb.Hsapiens.UCSC.hg18.knownGene 482 gahgu95bcdf 3 genomewidesnp5Crlmm 109 chickenprobe 18 moe430acdf 18 hguatlas13k.db 18 xlaevis2probe 15 mouse430a2cdf 24 mpedbarray.db 19 RnAgilentDesign028282.db 23 moe430a.db 37 pd.aragene.1.1.st 31 mu19ksubbcdf 15 pd.vitis.vinifera 21 mgu74bv2probe 15 rae230bcdf 16 pd.bovgene.1.1.st 82 ragene20stprobeset.db 17 TxDb.Celegans.UCSC.ce6.ensGene 270 Mu22v3.db 18 xlaevis.db 19 mu19ksubacdf 15 pd.porgene.1.0.st 22 BSgenome.Mmusculus.UCSC.mm9.masked 43 org.MeSH.Cal.SC5314.db 3 org.MeSH.Aga.PEST.db 2 org.MeSH.Dgr.db 3 BSgenome.Mmusculus.UCSC.mm8.masked 93 org.MeSH.Dsi.db 2 org.MeSH.Ddi.AX4.db 2 org.MeSH.Bsu.RONN1.db 2 org.MeSH.Ocu.db 2 org.MeSH.Sau.RF122.db 2 org.MeSH.Pfa.3D7.db 2 MeSH.db 11 org.MeSH.Tbr.9274.db 3 org.MeSH.Eco.APEC01.db 2 org.MeSH.Ana.db 3 org.MeSH.Eco.O157.H7.TW14359.db 2 org.MeSH.Eco.UMN026.db 2 org.MeSH.Pae.PAO1.db 2 SNPlocs.Hsapiens.dbSNP141.GRCh38 5 pd.guigene.1.1.st 29 pd.rcngene.1.0.st 21 pd.rjpgene.1.0.st 27 pd.soygene.1.0.st 28 hugene10st.db 1 hs133phsentrezgcdf 1 lumiRatV1 1 gahgu133plus2 1 SNPlocs.Hsapiens.dbSNP.20071016 1 illuminaHumanv1 1 hsfocushsentrezgcdf 1 hs133pptense7cdf 1 hsex10stv2ptensg7cdf 1 hs133phsenst7probe 1 hs133xptensg7cdf 1 lumiHumanV1 1 mgu74av2 1 hs133bhsense7probe 1 hs133bptense7probe 1 u133aaofav2cdf 20 rhesus.db0 20 BSgenome.Hsapiens.UCSC.hg17 29 pd.mirna.3.1 21 RmiR.Hs.miRNA 20 hthgu133acdf 27 hgu133plus2cdf 701 mirna10probe 16 ath1121501cdf 51 r10kcod.db 18 BSgenome.Rnorvegicus.UCSC.rn4.masked 20 BSgenome.Gaculeatus.UCSC.gasAcu1 29 SNPlocs.Hsapiens.dbSNP.20101109 9 mgu74bv2.db 21 BSgenome.Mmusculus.UCSC.mm10.masked 72 hcg110.db 22 BSgenome.Dmelanogaster.UCSC.dm2.masked 17 rtu34cdf 16 canine2cdf 18 SIFT.Hsapiens.dbSNP132 71 ye6100subccdf 16 pd.e.coli.2 28 BSgenome.Gaculeatus.UCSC.gasAcu1.masked 15 paeg1acdf 17 mu11ksuba.db 21 hom.At.inp.db 5 BSgenome.Mmusculus.UCSC.mm9 372 gahgu133aprobe 4 pd.ragene.1.0.st.v1 24 hgu133a2.db 249 rgu34a.db 26 hu6800probe 16 hgu133afrmavecs 50 rhesusprobe 17 org.Sc.sgd.db 577 hgu219probe 18 h10kcod.db 18 pd.bsubtilis 23 drosgenome1.db 41 htmg430aprobe 16 IlluminaHumanMethylation450kmanifest 1163 gahgu133bcdf 3 mirna102xgaincdf 17 anopheles.db0 22 mouse4302frmavecs 79 BSgenome.Ggallus.UCSC.galGal3.masked 16 rgu34c.db 20 hugene11stprobeset.db 32 pd.zebgene.1.1.st 29 hgu133atagprobe 31 pd.u133.x3p 29 BSgenome.Mmulatta.UCSC.rheMac2.masked 15 hgu95c.db 22 mogene20sttranscriptcluster.db 33 hom.Sc.inp.db 5 mgu74av2cdf 20 mogene10stprobeset.db 23 SNPlocs.Hsapiens.dbSNP.20111119 4 pd.moex.1.0.st.v1 33 IlluminaHumanMethylation27k.db 31 BSgenome.Rnorvegicus.UCSC.rn5.masked 38 hgu95cprobe 17 rae230acdf 20 nugohs1a520180probe 15 illuminaMousev2.db 54 org.Xl.eg.db 276 HuExExonProbesetLocationHg19 15 hgu95bcdf 17 yeast2probe 16 bovine.db0 31 plasmodiumanophelescdf 35 gahgu95av2.db 3 targetscan.Hs.eg.db 131 ragene10stprobeset.db 20 pd.rcngene.1.1.st 22 hgu95bprobe 17 hgug4845a.db 16 hu35ksubc.db 21 hu35ksubccdf 16 drosophila2cdf 21 pd.hg.u133a 66 mgu74cv2.db 25 pd.hg.u95e 22 pedbarrayv10.db 18 rtu34probe 16 human1mv1cCrlmm 19 mgu74bcdf 15 ye6100subdcdf 16 RmiR.hsa 21 bsubtiliscdf 17 porcinecdf 17 poplarcdf 18 FDb.FANTOM4.promoters.hg19 17 human650v3aCrlmm 19 pd.hugene.1.1.st.v1 69 mgu74av2.db 31 pd.zebgene.1.0.st 22 pd.ovigene.1.0.st 23 maizecdf 17 mgu74a.db 23 BSgenome.Osativa.MSU.MSU7 36 ye6100subbcdf 15 vitisviniferacdf 15 pd.chicken 24 pd.cangene.1.0.st 30 pd.hg.u133a.tag 21 pd.mogene.2.1.st 39 rae230a 1 org.MeSH.Eco.K12.MG1655.db 2 org.MeSH.Eco.O157.H7.Sakai.db 2 org.MeSH.Eco.SE11.db 2 org.MeSH.Cel.db 2 org.MeSH.Lma.db 2 org.MeSH.Hsa.db 2 BSgenome.Mfuro.UCSC.musFur1 17 pd.rabgene.1.1.st 21 org.MeSH.Sau.M013.db 2 org.MeSH.Sau.USA300FPR3757.db 2 org.MeSH.Cja.db 3 org.MeSH.Sau.MRSA252.db 3 org.MeSH.Dvi.db 2 org.MeSH.Laf.db 2 org.MeSH.Sau.ED98.db 3 org.MeSH.Sau.N315.db 2 MafDb.ALL.wgs.phase1.release.v3.20101123 3 huex10stprobeset.db 21 mta10sttranscriptcluster.db 1 pd.nugo.mm1a520177 21 pd.hta.2.0 82 pd.rusgene.1.0.st 20 pd.chogene.2.0.st 20 pd.chogene.2.1.st 20 pd.drogene.1.0.st 27 gahgu95av2 1 gahgu133a 1 dmdrosophila2dmrefseq 1 hs95av2ptensg7cdf 1 hs95av2ptensg7probe 1 u133x3p 1 dmdrosophila2dmensg7probe 1 illuminaMousev1p1 1 hs133xhsense7probe 1 hwgcod 1 hs133pptensg7cdf 1 hs133phsug7probe 1 mouse4302 1 mm430mmense 1 org.Mm.eg.db 7686 hwgcod.db 20 pd.plasmodium.anopheles 22 pd.zebrafish 21 pd.hg.u133.plus.2 254 mirna20cdf 18 BSgenome.Dmelanogaster.UCSC.dm3 227 ath1121501probe 21 HsAgilentDesign026652.db 40 pd.hg.focus 25 hgu133acdf 239 KEGG.db 274 adme16cod.db 22 nugohs1a520180cdf 16 pd.ragene.1.1.st.v1 29 hgu133b.db 40 pd.mg.u74c 24 canine2probe 16 mu11ksubbprobe 15 mouse4302cdf 137 IlluminaHumanMethylation27kmanifest 24 SNPlocs.Hsapiens.dbSNP.20100427 4 org.Ag.eg.db 221 BSgenome.Hsapiens.UCSC.hg19 2909 org.Ce.eg.db 477 rnu34.db 20 hom.Dr.inp.db 5 hthgu133bprobe 17 pd.wheat 30 BSgenome.Drerio.UCSC.danRer5 29 htmg430pmprobe 17 hom.Dm.inp.db 6 hgu133a2probe 24 pd.xenopus.laevis 22 TxDb.Scerevisiae.UCSC.sacCer2.sgdGene 16 mu19ksuba.db 20 mogene21stprobeset.db 20 pd.hg18.60mer.expr 41 hu6800subacdf 16 BSgenome.Ptroglodytes.UCSC.panTro2.masked 16 pd.mouse430.2 45 pd.rhegene.1.1.st 28 porcineprobe 16 mu19ksubccdf 16 hom.Rn.inp.db 5 org.EcK12.eg.db 261 pd.cytogenetics.array 29 oligoData 78 Roberts2005Annotation.db 18 mgu74bv2cdf 16 TxDb.Mmusculus.UCSC.mm10.knownGene 1416 citrusprobe 17 pd.mg.u74b 23 hu35ksubaprobe 16 hugene20sttranscriptcluster.db 54 hu6800subdcdf 16 illuminaHumanv4.db 262 pd.soybean 23 yeast2.db 48 gahgu95bprobe 3 pd.hc.g110 22 org.Tgondii.eg.db 4 pd.soygene.1.1.st 32 canineprobe 17 ygs98frmavecs 12 gahgu133plus2probe 3 gahgu133plus2cdf 4 BSgenome.Ptroglodytes.UCSC.panTro2 27 mguatlas5k.db 19 rnu34probe 16 hugene10stprobeset.db 34 mouse430a2frmavecs 15 plasmodiumanophelesprobe 15 canine2.db 21 pd.celegans 22 FDb.UCSC.snp137common.hg19 21 ragene10stv1cdf 18 mgu74acdf 15 drosophila2probe 123 mu6500subacdf 15 canine.db 21 drosophila2.db 25 BSgenome.Drerio.UCSC.danRer6 27 pd.hg.u95b 21 poplarprobe 16 pd.ovigene.1.1.st 24 pd.rg.u34b 21 pd.cyngene.1.0.st 23 mgug4121a.db 19 pd.yg.s98 21 illuminaMousev1p1.db 30 pd.mouse430a.2 27 rhesuscdf 18 pd.drosgenome1 23 ath1attair 1 hu6800 1 hsahomology 1 org.MeSH.Atu.K84.db 2 org.MeSH.Cfa.db 2 org.MeSH.Eco.55989.db 2 org.MeSH.Gma.db 2 org.MeSH.Eco.SMS35.db 2 org.MeSH.Mmu.db 2 org.MeSH.Rno.db 2 org.MeSH.Miy.db 2 org.MeSH.Sau.COL.db 2 pd.guigene.1.0.st 23 MeSH.PCR.db 7 org.MeSH.Syn.db 2 org.MeSH.Ptr.db 3 TxDb.Hsapiens.UCSC.hg38.knownGene 2660 pd.elegene.1.0.st 21 MafDb.ESP6500SI.V2.SSA137.dbSNP138 2 phastCons100way.UCSC.hg19 187 ChemmineDrugs 55 pd.rusgene.1.1.st 27 pd.elegene.1.1.st 20 pd.chigene.1.1.st 31 TxDb.Athaliana.BioMart.plantsmart21 2 illuminaHumanv4BeadID.db 1 illuminaRatv1BeadID.db 1 illuminaMousev2BeadID.db 2 gahgu95d 1 mogene10stv1.r3cdf 1 gmahomology 1 m20kcod 1 hgu133b 1 btahomology 1 moe430bprobe 16 hgfocus.db 33 hgug4112a.db 67 pd.sugar.cane 21 BSgenome.Hsapiens.UCSC.hg18 224 hgu219.db 76 hthgu133b.db 20 ragene21stprobeset.db 18 ecoliasv2probe 16 BSgenome.Dmelanogaster.UCSC.dm2 49 tomatoprobe 16 hgfocuscdf 49 BSgenome.Celegans.UCSC.ce2 351 htratfocusprobe 16 pd.hg.u133b 27 IlluminaHumanMethylation450kanno.ilmn12.hg19 1331 hgu95dprobe 17 moe430bcdf 15 HuExExonProbesetLocation 20 hu35ksubbprobe 16 ygs98.db 31 org.Cf.eg.db 366 hgu95av2.db 712 pd.aragene.1.0.st 25 pd.rice 23 org.Bt.eg.db 433 TxDb.Athaliana.BioMart.plantsmart16 2 pd.hu6800 35 hugene11sttranscriptcluster.db 62 hu6800subbcdf 16 hugene.1.0.st.v1frmavecs 17 hgug4111a.db 21 lumiMouseIDMapping 17 mogene20stprobeset.db 21 BSgenome.Cfamiliaris.UCSC.canFam2 30 huex.1.0.st.v2frmavecs 22 rgu34b.db 20 BSgenome.Btaurus.UCSC.bosTau6 83 pd.rg.u34a 22 pd.charm.hg18.example 22 BSgenome.Scerevisiae.UCSC.sacCer1 148 pd.pae.g1a 22 BSgenome.Rnorvegicus.UCSC.rn4 53 org.Gg.eg.db 405 pd.ht.mg.430a 28 ecoli2cdf 17 org.Dr.eg.db 804 JazaeriMetaData.db 19 gahgu133a.db 4 bovinecdf 20 worm.db0 21 hgu133aprobe 131 hgubeta7.db 19 hi16cod.db 18 mogene21sttranscriptcluster.db 32 human370quadv3cCrlmm 18 gahgu133plus2.db 4 gahgu95cprobe 3 humancytosnp12v2p1hCrlmm 23 ratCHRLOC 12 soybeancdf 41 hgu133a2frmavecs 16 bsubtilisprobe 16 pd.drosophila.2 22 ragene20sttranscriptcluster.db 19 htmg430acdf 19 h20kcod.db 21 mu11ksubb.db 21 hugene21stprobeset.db 25 mu11ksubaprobe 16 pd.rjpgene.1.1.st 22 pd.ecoli.asv2 23 pd.mapping250k.nsp 117 chimp.db0 28 tomatocdf 16 m20kcod.db 18 BSgenome.Hsapiens.NCBI.b36v3 1 pd.rhesus 28 pd.2006.07.18.mm8.refseq.promoter 22 ygs98cdf 19 mogene11sttranscriptcluster.db 27 pd.barley1 23 humanomni5quadv1bCrlmm 12 BSgenome.Mmulatta.UCSC.rheMac3.masked 15 mogene.1.0.st.v1frmavecs 13 rgug4131a.db 18 SIFT.Hsapiens.dbSNP137 121 wheatcdf 20 xlahomology 1 org.MeSH.Bsu.168.db 2 org.MeSH.Bsu.TUB10.db 2 org.MeSH.Dda.3937.db 2 org.MeSH.Eco.536.db 2 org.MeSH.Cin.db 2 org.MeSH.Ani.FGSC.db 2 org.MeSH.Eco.E24377A.db 2 org.MeSH.Pae.PA14.db 2 BSgenome.Sscrofa.UCSC.susScr3 26 org.MeSH.Dya.db 2 org.MeSH.Bta.db 3 MeSH.AOR.db 7 org.MeSH.Bsu.Bsn5.db 2 XtraSNPlocs.Hsapiens.dbSNP141.GRCh38 4 org.MeSH.Der.db 2 org.MeSH.Mml.db 2 org.MeSH.Eqc.db 2 org.MeSH.Cbr.db 3 org.MeSH.Mtr.db 2 huex10sttranscriptcluster.db 38 mta10stprobeset.db 1 humanomni258v1aCrlmm 1 raex10stprobeset.db 19 SNPlocs.Hsapiens.dbSNP.20080617 1 ragene10stv1.r3cdf 1 illuminaMousev1p1BeadID.db 1 hs95av2hsentrezgcdf 1 hs133av2ptensg7cdf 1 hguatlas13k 1 cfcanine2cfense7cdf 1 domainsignatures 0 mm74av1mmentrezgprobe 1 hs133xhsrefseq7probe 1 drosophila2 1 hs133av2hsentrezg 1 hs133bhsrefseq7cdf 1 hs133bptensg7cdf 1 yeast2 1 hu6800.db 196 paeg1aprobe 15 hgu133bcdf 44 hugene10stv1cdf 99 GO.db 21171 mwgcod.db 18 IlluminaHumanMethylation450k.db 15 u133x3p.db 27 BSgenome.Hsapiens.UCSC.hg19.masked 148 pd.mg.u74av2 28 TxDb.Athaliana.BioMart.plantsmart19 2 pd.mg.u74cv2 22 hgu95av2 87 sugarcaneprobe 15 cottonprobe 17 humanCHRLOC 54 rtu34.db 20 saureusprobe 16 ath1121501.db 53 BSgenome.Ptroglodytes.UCSC.panTro3 28 BSgenome.Ggallus.UCSC.galGal3 111 gahgu133acdf 3 pd.hugene.2.1.st 57 hgu95aprobe 19 BSgenome.Dmelanogaster.UCSC.dm3.masked 18 rgu34bcdf 17 nugohs1a520180.db 18 illuminaHumanWGDASLv4.db 27 BSgenome.Mmusculus.UCSC.mm8 98 Homo.sapiens 1134 BSgenome.Hsapiens.UCSC.hg17.masked 16 mouse4302.db 194 pd.moe430a 25 rae230bprobe 16 gahgu133b.db 3 pd.hg.u219 38 zebrafishprobe 16 hgu133a2cdf 108 hu35ksuba.db 21 illuminaHumanWGDASLv3.db 19 pd.bovine 24 u133x3pcdf 23 POCRCannotation.db 18 genomewidesnp6Crlmm 118 gahgu95d.db 3 vitisviniferaprobe 15 hthgu133bcdf 15 BSgenome.Btaurus.UCSC.bosTau4.masked 16 pd.huex.1.0.st.v2 112 pd.cyrgene.1.1.st 22 barley1probe 17 hgu95e.db 22 mogene10stv1cdf 40 hthgu133aprobe 18 maizeprobe 16 ecoli2.db 19 chicken.db0 22 humanomni1quadv1bCrlmm 19 hgug4110b.db 24 rnu34cdf 16 zebrafish.db0 28 SNPlocs.Hsapiens.dbSNP.20110815 4 org.Ss.eg.db 404 mu6500subdcdf 16 mogene11stprobeset.db 22 test2cdf 15 gahgu95c.db 3 mgu74cv2cdf 16 rgug4105a.db 17 BSgenome.Ggallus.UCSC.galGal4 32 IlluminaHumanMethylation450kprobe 22 pd.hugene.2.0.st 90 u133x3pprobe 16 primeviewprobe 21 pd.raex.1.0.st.v1 25 pd.citrus 22 gahgu95ecdf 3 nugomm1a520177.db 18 mu6500subbcdf 15 mu19ksubc.db 20 LAPOINTE.db 19 mu6500subccdf 15 ragene21sttranscriptcluster.db 19 rgu34bprobe 16 xenopuslaeviscdf 15 BSgenome.Drerio.UCSC.danRer6.masked 16 pd.felgene.1.0.st 23 pd.yeast.2 22 BSgenome.Hsapiens.UCSC.hg18.masked 64 hgu133plus2 1 org.MeSH.Aml.db 2 miRNAtap.db 105 org.MeSH.Ath.db 2 org.MeSH.Cpo.db 2 org.MeSH.Bsu.W23.db 2 org.MeSH.Eco.B.REL606.db 3 org.MeSH.Eco.IAI1.db 2 BSgenome.Sscrofa.UCSC.susScr3.masked 16 org.MeSH.Eco.CFT073.db 2 org.MeSH.Mes.db 2 org.MeSH.Nle.db 3 TxDb.Athaliana.BioMart.plantsmart22 140 org.MeSH.Mdo.db 2 org.MeSH.Sau.VC40.db 2 org.MeSH.Spo.972h.db 2 org.MeSH.Sau.Mu3.db 2 org.MeSH.Pae.LESB58.db 3 org.MeSH.Sau.MSHR1132.db 2 org.MeSH.Ssc.db 2 org.MeSH.Xla.db 3 org.MeSH.Dse.db 2 org.MeSH.Pto.db 2 org.MeSH.Eco.IAI39.db 2 org.MeSH.Sau.Mu50.db 2 org.MeSH.Eco.BW2952.db 3 org.MeSH.Eco.O103.H2.12009.db 2 pd.mirna.4.0 34 pd.fingene.1.0.st 26 hs95av2hsense 1 Masks.Dmelanogaster.UCSC.dm3 1 gahgu133b 1 gahgu95c 1 humanLLMappings 1 mgug4122a 1 hvuhomology 1 hs133aptense7probe 1 KEGGprofile 0 cfcanine2cfensg7cdf 1 hgu95a 1 hgu133a2 1 lumiHumanV2 1 TxDb.Scerevisiae.UCSC.sacCer2.ensGene 1 hs133bhsense7cdf 1 hgu133a.db 855 hgu133plus2.db 1702 org.Hs.eg.db 17127 pd.x.tropicalis 23 pd.mu11ksubb 21 rat.db0 28 mirbase.db 233 BSgenome.Cfamiliaris.UCSC.canFam2.masked 16 TxDb.Dmelanogaster.UCSC.dm3.ensGene 535 rae230b.db 21 illuminaHumanv1.db 65 hgu95ecdf 17 hgu95dcdf 18 org.At.tair.db 720 wheatprobe 16 arabidopsis.db0 29 pd.mogene.1.1.st.v1 26 lumiHumanAll.db 89 cottoncdf 17 human660quadv1aCrlmm 14 chicken.db 23 pd.ragene.2.1.st 23 org.Dm.eg.db 1071 BSgenome.Hsapiens.NCBI.GRCh38 774 mgu74cprobe 16 pd.mirna.1.0 23 ecoliSakai.db0 19 hgu95a.db 575 sugarcanecdf 15 lumiHumanIDMapping 72 pd.rn.u34 20 targetscan.Mm.eg.db 18 pd.feinberg.mm8.me.hx1 21 BSgenome.Cfamiliaris.UCSC.canFam3 69 hugene21sttranscriptcluster.db 27 hgfocusprobe 41 pd.mu11ksuba 20 pd.poplar 22 org.Hs.ipi.db 4 mouse430a2probe 18 human550v3bCrlmm 13 hs25kresogen.db 17 hguqiagenv3.db 20 illuminaMousev1.db 31 org.EcSakai.eg.db 155 BSgenome.Ptroglodytes.UCSC.panTro3.masked 26 pd.ht.hg.u133a 31 moe430b.db 20 ye6100subacdf 14 hu35ksubcprobe 17 chickencdf 18 htmg430bprobe 16 pd.mirna.3.0 23 moe430aprobe 18 BSgenome.Athaliana.TAIR.04232008 23 mgu74cv2probe 16 BSgenome.Drerio.UCSC.danRer5.masked 15 canine.db0 22 pd.s.aureus 23 rguatlas4k.db 18 human1mduov3bCrlmm 19 BSgenome.Athaliana.TAIR.01222004 1 hu35ksubdprobe 16 cyp450cdf 16 Hs6UG171.db 19 ecoli2probe 16 org.Mmu.eg.db 420 lumiRatIDMapping 16 rgu34aprobe 17 xlaevis2cdf 15 htmg430pmcdf 21 illuminaRatv1.db 29 BSgenome.Celegans.UCSC.ce10 66 gahgu95b.db 3 caninecdf 17 ri16cod.db 17 mgu74b.db 21 pd.porcine 23 hu35ksubacdf 16 Mus.musculus 461 TxDb.Athaliana.BioMart.plantsmart12 3 ath1121501 1 BSgenome.Dmelanogaster.FlyBase.r51 1 indac.db 18 hgug4101a.db 20 lumiRatAll.db 17 ragene11stprobeset.db 18 mirna10cdf 31 pd.rae230b 22 pd.hg.u95c 23 pd.maize 22 IlluminaHumanMethylation450kannotation.ilmn.v1.2 1 pd.canine 22 pd.hg.u95d 21 org.MeSH.Dpe.db 2 org.MeSH.Dre.db 3 org.MeSH.Eco.ED1a.db 3 org.MeSH.Eco.KO11FL.db 2 org.MeSH.Eco.O111.H.11128.db 2 org.MeSH.Mga.db 2 org.MeSH.Oan.db 3 org.MeSH.Sau.MSSA476.db 2 org.MeSH.Eco.S88.db 2 org.MeSH.Gga.db 2 org.MeSH.Sil.db 2 TxDb.Hsapiens.BioMart.igis 17 org.MeSH.Sau.Newman.db 3 org.MeSH.Cre.db 2 org.MeSH.Sco.A32.db 2 org.MeSH.Dme.db 2 org.MeSH.Xtr.db 3 org.MeSH.Eco.O127.H6.E2348.69.db 2 org.MeSH.Sce.S288c.db 2 moex10sttranscriptcluster.db 20 pd.margene.1.1.st 20 pd.drogene.1.1.st 20 celegans 1 KEGG 1 gahgu95b 1 illuminaHumanv3ProbeID.db 1 rat2302 1 hgu95e 1 atgenomeattigr7probe 1 hs133bptensg7probe 1 atgenomeattigr7cdf 1 dmgenome1dmrefseq7probe 1 illuminaMousev1 1 TxDb.Mmusculus.BioMart.igis 0 hs133ahsensgcdf 1 hugene10sttranscriptcluster.db 568 BSgenome.Cfamiliaris.UCSC.canFam3.masked 18 BSgenome.Amellifera.UCSC.apiMel2.masked 17 SNPlocs.Hsapiens.dbSNP.20120608 12 ragene11sttranscriptcluster.db 19 saureuscdf 18 hgu133atagcdf 44 medicagoprobe 16 SHDZ.db 17 pd.mg.u74a 25 mi16cod.db 18 mgu74av2probe 16 celegansprobe 17 mgug4120a.db 19 reactome.db 3114 hugene20stprobeset.db 24 rwgcod.db 17 xtropicaliscdf 15 BSgenome.Mmulatta.UCSC.rheMac2 30 ag.db 23 nugomm1a520177probe 16 cMAP 64 MoExExonProbesetLocation 18 xenopus.db0 19 hthgu133pluspmcdf 32 gahgu95dcdf 3 pd.cotton 23 htmg430bcdf 15 BSgenome.Btaurus.UCSC.bosTau3.masked 15 pd.081229.hg18.promoter.medip.hx1 21 GGHumanMethCancerPanelv1.db 18 bovine.db 22 pd.mapping250k.sty 118 BSgenome.Btaurus.UCSC.bosTau6.masked 72 m10kcod.db 18 BSgenome.Rnorvegicus.UCSC.rn5 157 pd.ragene.2.0.st 25 soybeanprobe 16 PartheenMetaData.db 18 FDb.InfiniumMethylation.hg18 62 htrat230pmprobe 17 BSgenome.Alyrata.JGI.v1 18 BSgenome.Btaurus.UCSC.bosTau4 34 Norway981.db 18 gahgu95dprobe 3 BSgenome.Mmulatta.UCSC.rheMac3 30 pd.genomewidesnp.5 119 test3cdf 16 rgu34ccdf 16 ragene10stv1probe 16 hgug4100a.db 21 hu6800cdf 19 BSgenome.Amellifera.UCSC.apiMel2 29 ricecdf 21 ecoliasv2cdf 16 pd.mogene.1.0.st.v1 83 hu35ksubbcdf 16 pd.genomewidesnp.6 136 mogene10stv1probe 19 malaria.db0 21 gp53cdf 17 rattoxfxcdf 16 gahgu95ccdf 3 zebrafish.db 23 hgu95d.db 21 zebrafishcdf 19 hu35ksubd.db 21 FDb.UCSC.snp135common.hg19 19 yeast.db0 20 celegans.db 31 adme16cod 1 mouse430a2.db 57 MmAgilentDesign026655.db 23 pd.2006.10.31.rn34.refseq.promoter 21 mu19ksubb.db 20 humanomni25quadv1bCrlmm 13 mm24kresogen.db 16 mu11ksubbcdf 15 pd.equgene.1.0.st 24 pd.equgene.1.1.st 31 pd.cangene.1.1.st 22 GO 1 BSgenome.Tguttata.UCSC.taeGut1 25 org.MeSH.Eco.O157.H7.EDL933.db 3 org.MeSH.Dan.db 2 org.MeSH.Eco.O26.H11.11368.db 2 org.MeSH.Eco.UTI89.db 2 org.MeSH.Dmo.db 2 org.MeSH.Eco.K12.DH10B.db 3 org.MeSH.Eco.O157.H7.EC4115.db 2 org.MeSH.Osa.db 3 org.MeSH.Spu.db 2 org.MeSH.Pae.PA7.db 2 org.MeSH.Tgu.db 2 org.MeSH.Zma.db 2 org.MeSH.Bfl.db 2 org.MeSH.Ame.db 2 org.MeSH.Pab.db 2 Hspec 14 BSgenome.Dmelanogaster.UCSC.dm6 182 humanomni258v1p1bCrlmm 1 pd.nugo.hs1a520180 22 raex10sttranscriptcluster.db 18 pd.fingene.1.1.st 20 illuminaHumanv3BeadID.db 2 mm74av1mmentrezgcdf 1 org.Rn.sp.db 1 gahgu95e 1 mogene10st.db 1 hs133pptense7probe 1 hs133phsrefseq7probe 1 dmdrosophila2dmense7probe 1 dmdrosophila2dmenst7cdf 1 hs133xhsensg7probe 1 cfcanine2cfenst7cdf 1 hsex10stv2hsrefseq 1 lumiHumanIDMapping.db 1 org.Hs.sp.db 1 h20kcod 1 hs133phsentrezg 1 hgfocus 1 PFAM.db 767 illuminaHumanv2BeadID.db 19 hgu95av2cdf 315 pd.hg.u95a 105 pd.ht.hg.u133.plus.pm 33 pd.felgene.1.1.st 22 pd.cyrgene.1.0.st 29 rat2302cdf 37 BSgenome.Ggallus.UCSC.galGal4.masked 15 pd.mirna.2.0 24 hu35ksubdcdf 15 BSgenome.Ecoli.NCBI.20080805 234 mu11ksubacdf 16 mgug4122a.db 21 mouse.db0 28 ragene10sttranscriptcluster.db 23 TxDb.Hsapiens.UCSC.hg19.knownGene 4794 riceprobe 18 hu6800subccdf 16 illuminaHumanv3.db 197 DO.db 2236 BSgenome.Celegans.UCSC.ce6 22 nugomm1a520177cdf 15 hgu133plus2frmavecs 38 pd.rae230a 28 test1cdf 15 BSgenome.Amellifera.BeeBase.assembly4 22 PolyPhen.Hsapiens.dbSNP131 132 htrat230pmcdf 16 hgu95acdf 96 TxDb.Athaliana.BioMart.plantsmart14 2 hgu133plus2probe 132 pd.rg.u34c 21 pig.db0 20 pd.mogene.2.0.st 55 agcdf 19 rat2302.db 53 pd.x.laevis.2 22 fly.db0 34 rae230aprobe 58 hu35ksubb.db 21 pd.ag 22 pd.feinberg.hg18.me.hx1 21 rgu34acdf 19 org.Pt.eg.db 252 ygs98probe 16 hugene10stv1.r3cdf 1 hgu95ccdf 17 mouse4302probe 20 htratfocuscdf 17 seqnames.db 4 HuExExonProbesetLocationHg18 15 hguDKFZ31.db 19 citruscdf 18 hthgu133pluspmprobe 18 org.Pf.plasmo.db 48 ecoliK12.db0 22 gahgu95e.db 4 human610quadv1bCrlmm 43 yeast2cdf 18 ecoliprobe 17 hivprtplus2cdf 16 hcg110probe 16 TxDb.Athaliana.BioMart.plantsmart10 3 xenopuslaevisprobe 16 hgu95eprobe 17 SNPlocs.Hsapiens.dbSNP.20090506 4 TxDb.Mmusculus.UCSC.mm10.ensGene 118 agahomology 1 PANTHER.db 116 gahgu95av2cdf 3 gahgu95av2probe 3 hgu133bprobe 18 RaExExonProbesetLocation 17 ag 1 athhomology 1 pd.moe430b 22 hom.Mm.inp.db 6 BSgenome.Mmusculus.UCSC.mm10 1163 FDb.UCSC.tRNAs 150 hgu95av2probe 216 primeviewcdf 57 hapmap370k 18 mgu74aprobe 16 mgu74c.db 21 rgu34cprobe 16 humanomniexpress12v1bCrlmm 16 human370v1cCrlmm 103 pd.cyngene.1.1.st 30 rgug4130a.db 18 mgu74bprobe 15 pd.rhegene.1.0.st 34 Mu15v1.db 18 pd.ath1.121501 25 test3probe 15 pedbarrayv9.db 18 pd.rat230.2 44 rattoxfxprobe 15 rat2302probe 19 TxDb.Rnorvegicus.UCSC.rn5.refGene 159 ath1atrefseq 1 hgu133a 2 org.MeSH.Aca.db 2 BSgenome.Tguttata.UCSC.taeGut1.masked 14 pd.rabgene.1.0.st 27 org.MeSH.Tgo.ME49.db 2 BSgenome.Rnorvegicus.UCSC.rn6 134 org.MeSH.Sau.MW2.db 2 TxDb.Rnorvegicus.BioMart.igis 15 org.MeSH.Oni.db 2 org.MeSH.Eco.HS.db 2 org.MeSH.Eco.O26.H7.CB9615.db 2 org.MeSH.Sau.USA300TCH1516.db 2 org.MeSH.Vvi.db 3 moex10stprobeset.db 20 pd.margene.1.0.st 26 pd.medgene.1.0.st 25 pd.medgene.1.1.st 20 pd.chigene.1.0.st 20 illuminaHumanv1BeadID.db 2 hspeccdf 14 lumiMouseV1 1 rwgcod 1 illuminaHumanv2 1 illuminaMousev1BeadID.db 2 illuminaHumanDASLBeadID.db 1 hs133aptentrezgprobe 1 YEAST 1 hs133phsentrezg7cdf 1 hs133bhsentrezg7probe 1 dmgenome1dmenst7probe 1 dmgenome1dmensg7cdf 1 hsex10stv2hsrefseqprobe 1 hs133ahsentrezgcdf 1 hs133ahsentrezg 1 mouse430a2 1 MeSH.Aca.eg.db 5 MeSH.Pae.PAO1.eg.db 4 MeSH.Pae.LESB58.eg.db 0 MeSH.Dsi.eg.db 4 MeSH.Eco.APEC01.eg.db 0 MeSH.Eco.O26.H7.CB9615.eg.db 0 MeSH.Eco.E24377A.eg.db 0 MeSH.Eco.IAI1.eg.db 1 MeSH.Dre.eg.db 4 MeSH.Sau.COL.eg.db 0 MeSH.Sau.USA300FPR3757.eg.db 0 MeSH.Cbr.eg.db 4 MeSH.Ath.eg.db 4 MeSH.Eco.KO11FL.eg.db 0 MeSH.Eco.ED1a.eg.db 3 MeSH.Dan.eg.db 4 MeSH.Mml.eg.db 4 MeSH.Eco.O103.H2.12009.eg.db 0 MeSH.Eco.IAI39.eg.db 3 MeSH.Ocu.eg.db 4 MeSH.Tgu.eg.db 4 SNPlocs.Hsapiens.dbSNP142.GRCh37 7 MafDb.ESP6500SI.V2.SSA137 2 MeSH.Sil.eg.db 4 BSgenome.Mfascicularis.NCBI.5.0 25 BSgenome.Drerio.UCSC.danRer10 159 rn230rnense7cdf 1 rn34arnensg7probe 1 rn230rnentrezg7cdf 1 rn230rnenst7cdf 1 rguatlas4k 1 rgu34c 1 r10kcod 1 hi16cod 1 hgug4100a 1 mm74cv2mmensecdf 1 rn230brnentrezgprobe 1 mm430mmensecdf 1 mm430ammugcdf 1 hs133phsrefseq 1 hgu95c 1 mm11ksubbmmenst7probe 1 mm11ksubbmmentrezg7probe 1 mm430bmmentrezg7cdf 1 mm74av1mmrefseq7probe 1 mm74av2mmenst7cdf 1 mmex10stv1mmrefseq7cdf 1 mmex10stv1mmrefseq7probe 1 atgenomeattigr 1 ath1attigrcdf 1 BSgenome.Dmelanogaster.BDGP.Release5 1 ggchickenggensg7cdf 1 egohomology 1 mouseLLMappings 1 hs133xhsenstprobe 1 hs133xhsentrezgprobe 1 hs133xptensgprobe 1 hs95av2hsenstcdf 1 hs95av2hsentrezg 1 hs95av2hsrefseqcdf 1 hs95av2hsug 1 hs95av2ptensg 1 hs95av2ptensgprobe 1 hs95av2ptenst 1 hs95av2ptenstprobe 1 hsex10stv2hsentrezg 1 hsex10stv2hsentrezgcdf 1 BSgenome.Mmusculus.UCSC.mm7 1 btbovinebtenst 1 btbovinebtenstprobe 1 cfahomology 1 cfcanine2cfensg 1 cfcanine2cfentrezgprobe 1 cfcanine2cfrefseqcdf 1 cfcanine2cfugcdf 1 cfcanine2cfugprobe 1 dmdrosophila2dmense 1 dmdrosophila2dmrefseqcdf 1 dmgenome1dmenst 1 dmgenome1dmugcdf 1 drzebrafishdrensgprobe 1 drzebrafishdrugcdf 1 drzebrafishdrugprobe 1 ggchickenggensgcdf 1 ggchickenggensgprobe 1 ggchickenggentrezg 1 ggchickenggentrezgprobe 1 ggchickenggug 1 hgu95d 1 hguDKFZ31 1 hs133ahsenstcdf 1 hs133ahsrefseqcdf 1 hs133aptentrezg 1 hs133av2hsenstprobe 1 hs133av2hsenseprobe 1 hs133av2hsentrezgcdf 1 hs133av2hsug 1 HsapiensGenome.hg16 1 hsex10stv2hsenst7cdf 1 hsex10stv2hsug7cdf 1 hsfocushsense7probe 1 hsfocushsrefseq7probe 1 indac 1 mm11ksubammentrezg 1 mm11ksubammrefseq 1 mm11ksubammrefseqprobe 1 mm11ksubammug 1 rn230arnrefseq 1 rn230brnentrezg 1 rn230rnentrezg 1 rn230rnentrezgprobe 1 rn230rnugcdf 1 rn230rnugprobe 1 rn34arnenseprobe 1 rnex10stv1rnenstprobe 1 rnex10stv1rnentrezgprobe 1 dmgenome1dmense7cdf 1 dmgenome1dmug7cdf 1 drzebrafishdrense7probe 1 drzebrafishdrenst7cdf 1 hs133ahsenst7cdf 1 hs133ahsrefseq7probe 1 hs133ahsug7probe 1 hs133av2hsensg7probe 1 hs133av2hsenst7cdf 1 hs133phsenst7cdf 1 hs133pptensg7probe 1 hs133xhsense7cdf 1 hs133xhsenst7probe 1 hs133xhsentrezg7probe 1 hs133xhsug7probe 1 hs133xptensg7probe 1 hs95av2ptense7cdf 1 hs133av2ptenst 1 hs133bhsense 1 hs133bhsugprobe 1 hs133bptentrezg 1 hs133phsense 1 hs133pptensg 1 rnex10stv1rnug 1 int.mppi.db 1 sc.dbsubloc.db 1 org.Hs.ref.db 1 hs133av2ptrefseqcdf 1 mm430mmenstprobe 1 mm74cv2mmvegat 1 mm74cv2mmenst 1 mamurhesusmamuenst 1 mm74cv2mmentrezg 1 mm74av2mmrefseqprobe 1 mm430a2mmenstprobe 1 hsfocusptrefseqprobe 1 mm74bv2mmrefseqprobe 1 mamurhesusmamuensgcdf 1 mm430ammenst 1 mm430ammentrezg 1 mm74bv2mmug 1 mm430mmvegagprobe 1 mm74bv2mmensgcdf 1 mm74cv2mmvegag 1 mm430ammvegaeprobe 1 mm74av1mmrefseq 1 mm74bv2mmugprobe 1 hs133xhsvegatprobe 1 hs133av2hsvegagcdf 1 hs133av2ptensgcdf 1 hs133phsvegatcdf 1 pedbarrayv10 1 hs133xhsvegae 1 hs133xhsvegat 1 hs95av2ptrefseqprobe 1 hsfocushsugcdf 1 mamurhesusmamuensecdf 1 mm11ksubammvegatcdf 1 mm430a2mmugcdf 1 mm430ammensgprobe 1 mm430ammvegaecdf 1 mm430bmmenseprobe 1 mm430bmmensgprobe 1 mm430bmmenst 1 mm430bmmug 1 mm430bmmvegagprobe 1 mm430mmensg 1 mm74av1mmense 1 CelegansGenome.ce2 1 vvgrapevvtigrcdf 1 MeSH.Syn.eg.db 5 MeSH.Eqc.eg.db 3 MeSH.Pto.eg.db 4 MeSH.Pfa.3D7.eg.db 4 MeSH.Dmo.eg.db 4 MeSH.Dse.eg.db 4 MeSH.Bsu.Bsn5.eg.db 0 MeSH.Laf.eg.db 4 MeSH.Eco.UMN026.eg.db 3 MeSH.Eco.K12.DH10B.eg.db 1 MeSH.Dda.3937.eg.db 4 MeSH.Dvi.eg.db 4 MeSH.Xla.eg.db 4 MafDb.ExAC.r0.3.sites 1 pd.rta.1.0 30 MeSH.Spo.972h.eg.db 2 EnsDb.Rnorvegicus.v79 87 MeSH.Tbr.9274.eg.db 4 SNPlocs.Hsapiens.dbSNP144.GRCh38 606 MafDb.ALL.wgs.phase3.release.v5b.20130502 1 phastCons100way.UCSC.hg38 129 xtrhomology 1 ScerevisiaeGenome.sacCer1 1 rnex10stv1rnug7cdf 1 rnex10stv1rnense7probe 1 rn34arnenst7probe 1 rn230brnug7probe 1 rn230brnenst7cdf 1 rn230rnrefseq7probe 1 rn230arnrefseq7cdf 1 rn230brnrefseq7probe 1 rae230b 1 mm430mmrefseqcdf 1 hs133av2hsugprobe 1 mi16cod 1 scop.db 1 hsfocushsense 1 drzebrafishdrenstprobe 1 Norway981 1 drzebrafishdrentrezgprobe 1 rn230rnensecdf 1 hs133pptenseprobe 1 mm11ksubammense7probe 1 mm11ksubammensg7cdf 1 mm11ksubbmmensg7cdf 1 mm11ksubbmmrefseq7probe 1 mm430ammenst7cdf 1 mm430ammrefseq7cdf 1 mm430bmmensg7probe 1 mm430mmensg7cdf 1 mm430mmentrezg7cdf 1 mm74av1mmenst7probe 1 mm74av1mmug7cdf 1 mm74av2mmense7cdf 1 mmex10stv1mmense7cdf 1 mmuhomology 1 atgenomeattigrprobe 1 ath1attigr 1 ggchickenggenst7probe 1 drzebrafishdrug7cdf 1 hgu95b 1 mwgcod 1 PFAM 1 hs95av2hsensg 1 hs95av2ptensgcdf 1 hs95av2ptenstcdf 1 hsex10stv2hsensecdf 1 hsex10stv2hsensg 1 hsex10stv2hsensgcdf 1 hsex10stv2hsugcdf 1 btbovinebtensg 1 btbovinebtrefseqcdf 1 btbovinebtrefseqprobe 1 cfcanine2cfense 1 cfcanine2cfenstprobe 1 cfcanine2cfentrezg 1 dmdrosophila2dmrefseqprobe 1 dmgenome1dmense 1 dmgenome1dmensg 1 ggchickenggenstcdf 1 hguqiagenv3 1 hs133ahsugprobe 1 hs133ahsvegaeprobe 1 hs133aptensgcdf 1 hs133av2hsense 1 hs133av2hsvegaeprobe 1 hsex10stv2hsense7cdf 1 hsex10stv2hsrefseq7cdf 1 hsfocushsensg7probe 1 hsfocushsrefseq7cdf 1 hsfocushsug7probe 1 hsfocusptense7probe 1 mm11ksubammentrezgprobe 1 mm11ksubbmmentrezgprobe 1 rn230brnenstcdf 1 rn230brnrefseq 1 rn34arnentrezgprobe 1 rn34arnrefseq 1 rnex10stv1rnenstcdf 1 cfcanine2cfenst7probe 1 dmdrosophila2dmug7probe 1 hs133av2hsense7probe 1 hs133av2hsentrezg7probe 1 hs133av2ptense7cdf 1 hs133av2ptensg7probe 1 hs133phsentrezg7probe 1 hs95av2hsug7probe 1 hs133bhsenseprobe 1 hs133bptenseprobe 1 hs133phsenseprobe 1 hs133phsrefseqprobe 1 hs133pptensecdf 1 hs133pptensgprobe 1 hs133xhsenseprobe 1 dName.db 1 mm74av2mmensecdf 1 mm74av2mmvegagprobe 1 hsfocushsvegatcdf 1 mm74bv2mmentrezgcdf 1 mm430a2mmvegaeprobe 1 mm74av1mmvegat 1 mm74bv2mmenseprobe 1 hsfocushsensecdf 1 mm430a2mmug 1 mm74cv2mmvegagprobe 1 mm430ammentrezgcdf 1 hs133av2ptensg 1 SHDZ 1 mmex10stv1mmrefseq 1 hs133pptrefseqcdf 1 hs133xhsvegagcdf 1 hs95av2hsvegagprobe 1 hs95av2hsvegat 1 hs95av2hsvegatcdf 1 mamurhesusmamuensgprobe 1 mm11ksubammvegag 1 mm430a2mmensg 1 mm430a2mmvegae 1 mm430mmenseprobe 1 mm430mmensgcdf 1 mm430mmentrezgcdf 1 mm430mmrefseqprobe 1 mm430mmugcdf 1 mm430mmvegae 1 mm74av1mmugprobe 1 mm74av2mmentrezg 1 mm74av2mmugcdf 1 mm74bv2mmensg 1 mm74bv2mmensgprobe 1 mm74bv2mmentrezgprobe 1 mm74bv2mmvegag 1 mm74cv2mmense 1 cfcanine2cfensg7probe 1 mmex10stv1mmensecdf 1 hsex10stv2ptensgprobe 1 hsex10stv2ptentrezgprobe 1 osriceostigrcdf 1 MeSH.Bta.eg.db 4 MeSH.Lma.eg.db 4 MeSH.Cin.eg.db 4 MeSH.Mga.eg.db 4 MeSH.Aml.eg.db 4 MeSH.Nle.eg.db 4 MeSH.Cpo.eg.db 4 MeSH.Mes.eg.db 4 MeSH.Vvi.eg.db 4 MeSH.Ana.eg.db 4 EnsDb.Hsapiens.v75 826 pd.mta.1.0 38 moe430a 1 moe430b 1 TxDb.Athaliana.BioMart.plantsmart28 60 BSgenome.Vvinifera.URGI.IGGP12Xv0 15 rtu34 1 sschomology 1 rnex10stv1rnentrezg7cdf 1 rnex10stv1rnense7cdf 1 rn230rnensg7cdf 1 rn230brnensg7probe 1 rn230arnensg7cdf 1 hu35ksubb 1 hsfocusptrefseq 1 mm430bmmensgcdf 1 mm74av1mmugcdf 1 hs133av2hsvegat 1 hs133pptentrezgprobe 1 mm11ksubbmmenstcdf 1 MeSH.Sau.N315.eg.db 0 hs133bhsrefseqcdf 1 rn34arnugprobe 1 mm11ksubammenst7probe 1 mm11ksubammrefseq7probe 1 mm11ksubammug7cdf 1 mm11ksubbmmentrezg7cdf 1 mm11ksubbmmrefseq7cdf 1 mm430ammentrezg7cdf 1 mm430ammrefseq7probe 1 mm430ammug7cdf 1 mm430ammug7probe 1 mm430bmmug7cdf 1 mm430mmense7cdf 1 mm430mmentrezg7probe 1 mm74av1mmensg7cdf 1 mm74av2mmensg7cdf 1 mm74av2mmensg7probe 1 mm74av1mmug7probe 1 mm74av2mmrefseq7cdf 1 mmex10stv1mmentrezg7cdf 1 atgenomeattair 1 ath1atrefseqcdf 1 ggchickenggense7cdf 1 hs133xhsrefseqcdf 1 hs133xptentrezgprobe 1 hs95av2hsensecdf 1 hs95av2ptentrezg 1 hs95av2ptense 1 btbovinebtense 1 btbovinebtentrezgprobe 1 cfcanine2cfrefseq 1 cfcanine2cfrefseqprobe 1 cinhomology 1 dmgenome1dmensgprobe 1 drzebrafishdrensgcdf 1 drzebrafishdrentrezg 1 ggchickenggensecdf 1 ggchickenggugcdf 1 hs133ahsentrezgprobe 1 hs133ahsrefseqprobe 1 hs133ahsvegaecdf 1 hs133ahsvegagprobe 1 hs133ahsvegat 1 hs133av2hsenst 1 hs133av2hsensg 1 hsex10stv2ptensg7probe 1 hsfocushsensg7cdf 1 hsfocushsentrezg7cdf 1 hu35ksubc 1 klahomology 1 m10kcod 1 mm11ksubammenstcdf 1 mm11ksubammentrezgcdf 1 mm11ksubammugprobe 1 rn230arnrefseqprobe 1 rn230arnugprobe 1 rn230brnenst 1 rn230rnensgprobe 1 rn230rnenst 1 rn34arnensecdf 1 rn34arnensgcdf 1 rn34arnenstprobe 1 rn34arnugcdf 1 rnex10stv1rnenst 1 cfcanine2cfentrezg7probe 1 dmgenome1dmense7probe 1 dmgenome1dmrefseq7cdf 1 drzebrafishdrenst7probe 1 drzebrafishdrentrezg7probe 1 hs133ahsentrezg7cdf 1 hs133av2hsense7cdf 1 hs133av2hsensg7cdf 1 hs133av2hsrefseq7cdf 1 hs133av2hsrefseq7probe 1 hs133av2hsug7cdf 1 hs133phsense7cdf 1 hs133phsrefseq7cdf 1 hs133phsug7cdf 1 hs133xhsenst7cdf 1 hs95av2hsentrezg7cdf 1 hs95av2hsentrezg7probe 1 hs133xhsug7cdf 1 hs133xptense7probe 1 hs95av2hsensg7cdf 1 hs133bhsentrezg 1 hs133bhsug 1 hs133bptenstprobe 1 hs133phsensgprobe 1 hs133phsenst 1 hs133phsug 1 hs133phsugcdf 1 hs133pptense 1 hs133pptensgcdf 1 hs133xhsense 1 org.Rn.ipi.db 1 org.Hs.cross.db 1 mm11ksubammvegagprobe 1 hs133av2ptrefseqprobe 1 mm74bv2mmenst 1 BSgenome.Mmusculus.UCSC.mm6 1 mm430a2mmvegaecdf 1 mm74bv2mmrefseq 1 mm430a2mmrefseqprobe 1 mm11ksubammvegaeprobe 1 mm74av1mmvegag 1 hsfocusptenseprobe 1 mm430a2mmensecdf 1 mm11ksubbmmvegagcdf 1 mm74cv2mmenseprobe 1 hsfocusptentrezg 1 osriceosrefseqprobe 1 mm74av2mmenstcdf 1 hs133av2hsvegagprobe 1 mamurhesusmamuenseprobe 1 hs133av2ptense 1 hs133bptrefseq 1 hs133phsvegae 1 ri16cod 1 rn230arnensg 1 mmex10stv1mmentrezgprobe 1 hs133pptrefseq 1 hs133xhsvegaecdf 1 hs133xhsvegag 1 hs133xptrefseqprobe 1 hs95av2hsvegaecdf 1 hsfocushsvegatprobe 1 illuminaRatv1 1 mamurhesusmamuugprobe 1 mm11ksubammvegagcdf 1 mm430a2mmvegagcdf 1 mm430a2mmvegatprobe 1 mm430ammenstprobe 1 mm430ammrefseq 1 mm430ammrefseqprobe 1 mm74av1mmensgprobe 1 mm74av1mmenstprobe 1 mm74av1mmrefseqprobe 1 mm74av2mmensgprobe 1 mm74av2mmugprobe 1 mm74bv2mmenstcdf 1 mm74cv2mmugcdf 1 mm74cv2mmugprobe 1 OperonHumanV3 1 MmusculusGenome.mm7 1 atgenomeatrefseq7probe 1 vvgrapevvtigrprobe 1 hsex10stv2ptensecdf 1 hsex10stv2ptenstcdf 1 osriceostigr 1 illuminaHumanv2ProbeID.db 1 MeSH.Bsu.168.eg.db 5 MeSH.Gga.eg.db 3 MeSH.Gma.eg.db 4 MeSH.Eco.O157.H7.EC4115.eg.db 0 MeSH.Pae.PA7.eg.db 0 MeSH.Pae.PA14.eg.db 0 MeSH.Rno.eg.db 4 MeSH.Aga.PEST.eg.db 4 MeSH.Eco.BW2952.eg.db 0 MeSH.Ptr.eg.db 4 MeSH.Eco.536.eg.db 0 MeSH.Eco.O127.H6.E2348.69.eg.db 1 MeSH.Eco.55989.eg.db 3 hta20stprobeset.db 1 MeSH.Xtr.eg.db 4 MeSH.Sau.USA300TCH1516.eg.db 1 grasp2db 54 hta20sttranscriptcluster.db 1 EnsDb.Mmusculus.v79 717 XtraSNPlocs.Hsapiens.dbSNP144.GRCh38 150 BSgenome.Vvinifera.URGI.IGGP12Xv2 19 scehomology 1 vvgrapevvtigr7probe 1 rnohomology 1 rnex10stv1rnenst7cdf 1 rn34arnense7probe 1 rn230rnentrezg7probe 1 rn230rnensg7probe 1 rn230brnense7probe 1 rn34arnenst7cdf 1 rn230brnenst7probe 1 rn230arnrefseq7probe 1 rn230arnense7cdf 1 rgu34b 1 ratLLMappings 1 ptrhomology 1 mm430a2mmrefseq 1 hsfocushsenst 1 mm430bmmenstcdf 1 hsfocushsvegat 1 ggchickenggenstprobe 1 btbovinebtenstcdf 1 dmdrosophila2dmenst 1 mm430bmmrefseqcdf 1 MeSH.Sau.RF122.eg.db 0 Roberts2005Annotation 1 mgug4104a 1 mm11ksubammensg7probe 1 mm430ammense7cdf 1 mm430bmmenst7probe 1 mm430bmmrefseq7cdf 1 mm74av1mmense7cdf 1 mm74av2mmense7probe 1 mmex10stv1mmenst7cdf 1 atgenomeattaircdf 1 ath1atrefseqprobe 1 ggchickenggensg7probe 1 mu19ksubb 1 osriceosrefseq7probe 1 osriceostigr7probe 1 hs133xptense 1 hs133xptensecdf 1 hs95av2hsensgcdf 1 hs95av2hsensgprobe 1 hs95av2ptentrezgcdf 1 hs95av2hsrefseqprobe 1 hsex10stv2hsense 1 hsex10stv2hsenstprobe 2 btbovinebtentrezg 1 canine2 1 cfcanine2cfvegatprobe 1 dmdrosophila2dmugprobe 1 dmgenome1dmenseprobe 1 dmgenome1dmrefseqprobe 1 drehomology 1 drzebrafishdrrefseqcdf 1 ggchickenggense 1 hs133ahsenseprobe 1 hs133ahsensgprobe 1 hs133aptensgprobe 1 hs133aptenstprobe 1 hs133aptrefseqcdf 1 hs133av2hsentrezgprobe 1 hsex10stv2hsensg7probe 1 hsex10stv2hsenst7probe 1 hsex10stv2hsentrezg7cdf 1 hsex10stv2hsentrezg7probe 1 hsfocushsug7cdf 1 hsfocusptense7cdf 1 mm11ksubammensgprobe 1 mm11ksubammrefseqcdf 1 mm11ksubbmmrefseqcdf 1 mm11ksubbmmug 1 rn230arnrefseqcdf 1 rn230brnense 1 rn230brnenstprobe 1 rn230brnrefseqcdf 1 rn34arnrefseqcdf 1 rnex10stv1rnensgcdf 1 dmdrosophila2dmense7cdf 1 dmdrosophila2dmenst7probe 1 cfcanine2cfrefseq7cdf 1 cfcanine2cfug7cdf 1 dmdrosophila2dmug7cdf 1 dmgenome1dmug7probe 1 drzebrafishdrense7cdf 1 drzebrafishdrensg7cdf 1 drzebrafishdrentrezg7cdf 1 drzebrafishdrrefseq7cdf 1 hs133aptense7cdf 1 hs133bhsenst7cdf 1 hs133phsense7probe 1 hs95av2hsrefseq7probe 1 hs95av2hsenst7cdf 1 hs133av2ptentrezgcdf 1 hs133bhsensg 1 hs133bhsensgcdf 1 hs133bhsenst 1 hs133bhsrefseq 1 hs133bhsrefseqprobe 1 hs133bhsugcdf 1 hs133phsenstprobe 1 hs133pptenstprobe 1 HsapiensGenome.hg17 1 org.Mm.cross.db 1 org.HsMm.ortholog.db 1 homolog.db 1 int.geneint.db 1 org.Hs.bf.db 1 org.Rn.ref.db 1 mm74av2mmensgcdf 1 mm430bmmensecdf 1 mm74av1mmentrezg 1 hsfocusptensecdf 1 mpedbarray 1 mm430bmmugcdf 1 mm11ksubbmmvegatcdf 1 mm430mmvegagcdf 1 mm74bv2mmense 1 hsfocushsug 1 hs133xhsvegaeprobe 1 mm430ammvegae 1 mm430bmmvegaecdf 1 mm74bv2mmvegaecdf 1 hcgi8k 1 hs133av2ptrefseq 1 hs133bptrefseqprobe 1 pedbarrayv9 1 rn230arnensecdf 1 mmex10stv1mmenst 1 hs133xptrefseq 1 hsfocushsentrezg 1 hsfocushsrefseqprobe 1 hsfocushsvegaeprobe 1 hsfocushsvegagprobe 1 hsfocusptense 1 mamurhesusmamuugcdf 1 mm11ksubammvegae 1 mm11ksubbmmvegaecdf 1 mm430a2mmugprobe 1 mm430mmvegat 1 mm430mmvegatcdf 1 mm74av1mmug 1 mm74av2mmentrezgcdf 1 mm74av2mmug 1 mm74av2mmvegaecdf 1 mm74bv2mmvegagcdf 1 mm74bv2mmvegatcdf 1 hsex10stv2ptense 1 hsex10stv2ptensg 1 hsex10stv2ptensgcdf 1 hsex10stv2ptenstprobe 1 illuminaRatv1ProbeID.db 1 MeSH.Hsa.eg.db 8 MeSH.Atu.K84.eg.db 1 MeSH.Osa.eg.db 5 MeSH.Pab.eg.db 4 MeSH.Dgr.eg.db 4 MeSH.Eco.B.REL606.eg.db 0 MeSH.Dpe.eg.db 4 MeSH.Sau.ED98.eg.db 0 MeSH.Eco.K12.MG1655.eg.db 4 MeSH.Cel.eg.db 4 MeSH.Eco.O111.H.11128.eg.db 0 MeSH.Cja.eg.db 4 MeSH.Der.eg.db 4 MeSH.Spu.eg.db 4 EnsDb.Mmusculus.v75 34 MeSH.Sco.A32.eg.db 4 XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 108 BSgenome.Hsapiens.1000genomes.hs37d5 844 zmahomology 1 taehomology 1 vvihomology 1 rnu34 1 rnex10stv1rnentrezg7probe 1 rnex10stv1rnenst7probe 1 rn34arnrefseq7probe 1 rn230rnrefseq7cdf 1 rn230brnense7cdf 1 rn34arnug7cdf 1 rn230arnentrezg7cdf 1 rn230brnentrezg7cdf 1 rn230arnenst7probe 1 rn230arnense7probe 1 rgug4130a 1 rn230arnug7cdf 1 rgu34a 1 hs133av2hsugcdf 1 drzebrafishdrvegat 1 hsfocushsvegag 1 rn230arnenstcdf 1 mm74av2mmrefseq 1 rn34arnentrezgcdf 1 mm74av2mmvegat 1 MeSH.Sau.Newman.eg.db 0 MeSH.Sau.MSHR1132.eg.db 0 rn230arnenst 1 mm11ksubammugcdf 1 mgug4120a 1 mgug4121a 1 mm11ksubammenst7cdf 1 mm11ksubbmmense7cdf 1 mm11ksubammrefseq7cdf 1 mm430ammense7probe 1 mm430bmmense7probe 1 mm430bmmensg7cdf 1 mm430bmmenst7cdf 1 mm430bmmrefseq7probe 1 mm430mmenst7cdf 1 mm430mmrefseq7cdf 1 mm430mmrefseq7probe 1 mm430mmug7cdf 1 mm430mmug7probe 1 mm74av1mmense7probe 1 mm74av2mmenst7probe 1 mm74av2mmug7cdf 1 mmex10stv1mmense7probe 1 mmex10stv1mmensg7cdf 1 mmex10stv1mmensg7probe 1 mmex10stv1mmug7probe 1 atgenomeatrefseq 1 atgenomeatrefseqprobe 1 ath1attaircdf 1 ath1attairprobe 1 BSgenome.Hsapiens.UCSC.hg16 1 ggchickenggenst7cdf 1 ggchickenggrefseq7probe 1 ggchickenggug7probe 1 ggahomology 1 ncrhomology 1 osriceosrefseq7cdf 1 hs25kresogen 1 hs95av2hsenseprobe 1 hs95av2hsrefseq 1 hsex10stv2hsenseprobe 1 hsex10stv2hsentrezgprobe 1 hsex10stv2hsrefseqcdf 1 btbovinebtensgcdf 1 btbovinebtug 1 btbovinebtugcdf 1 btbovinebtugprobe 1 cfcanine2cfvegat 1 dmdrosophila2dmensecdf 1 dmdrosophila2dmenseprobe 1 dmdrosophila2dmensgprobe 1 dmdrosophila2dmug 1 dmehomology 1 dmgenome1dmenstprobe 1 dmgenome1dmrefseq 1 dmgenome1dmrefseqcdf 1 dmgenome1dmugprobe 1 drzebrafishdrense 1 drzebrafishdrrefseq 1 drzebrafishdrug 1 ggchickenggensg 1 hs133ahsense 1 hs133ahsensecdf 1 hs133aptensg 1 hs133av2hsenstcdf 1 hs133av2hsrefseqcdf 1 hs133av2hsvegae 1 hsex10stv2hsrefseq7probe 1 hsex10stv2hsug7probe 1 hsfocushsenst7cdf 1 hsfocushsenst7probe 1 mguatlas5k 1 mm11ksubammensgcdf 1 mm11ksubbmmensecdf 1 mm11ksubbmmensgcdf 1 mm11ksubbmmensgprobe 1 mm11ksubbmmenst 1 mm11ksubbmmentrezgcdf 1 mm11ksubbmmugcdf 1 rn230arnensgprobe 1 rn230arnenstprobe 1 rn230arnentrezgprobe 1 rn230brnenseprobe 1 rn230brnensgcdf 1 rn230brnrefseqprobe 1 rn230brnugcdf 1 rn230brnugprobe 1 rn230rnenstprobe 1 rn230rnrefseq 1 rn230rnrefseqprobe 1 rn230rnug 1 rn34arnensgprobe 1 rn34arnenstcdf 1 rn34arnug 1 rnex10stv1rnentrezg 1 dmdrosophila2dmrefseq7cdf 1 dmgenome1dmensg7probe 1 dmgenome1dmenst7cdf 1 hs133ahsense7cdf 1 hs133ahsenst7probe 1 hs133ahsentrezg7probe 1 hs133ahsrefseq7cdf 1 hs133bhsug7probe 1 hs133phsensg7cdf 1 hs133phsensg7probe 1 hs95av2hsrefseq7cdf 1 hs133xptense7cdf 1 hs95av2hsenst7probe 1 hs95av2hsug7cdf 1 hs133av2ptenstprobe 1 hs133bhsensgprobe 1 hs133bhsenstcdf 1 hs133bhsentrezgcdf 1 hs133bhsentrezgprobe 1 hs133bptensgcdf 1 hs133bptentrezgprobe 1 hs133phsensgcdf 1 hs133pptenst 1 hs133pptenstcdf 1 hs133xhsensecdf 1 org.Hs.pep.db 1 int.did.db 1 sc.bacello.db 1 sysptm.db 1 org.Hs.goa.db 1 mm74cv2mmensgprobe 1 mm74av1mmensg 1 mm74av1mmvegatcdf 1 mm430mmenstcdf 1 mm74bv2mmvegat 1 mm74bv2mmugcdf 1 mm11ksubammvegaecdf 1 mm430bmmense 1 mm430bmmenstprobe 1 mm74av1mmenstcdf 1 mm11ksubbmmvegat 1 mm74av1mmvegaecdf 1 hsfocushsensgprobe 1 mm430bmmvegat 1 mm74cv2mmentrezgcdf 1 mm430bmmrefseqprobe 1 mm430ammvegatcdf 1 mm74cv2mmrefseq 1 hs133bhsvegagprobe 1 mm430bmmvegatprobe 1 mm74cv2mmensgcdf 1 mm74av2mmenst 1 osriceosrefseq 1 hs133av2ptensgprobe 1 hs133bhsvegaecdf 1 hs133bhsvegat 1 PartheenMetaData 1 hs133xhsvegagprobe 1 hsfocushsenstcdf 1 JazaeriMetaData 1 mm11ksubammvegatprobe 1 mm11ksubbmmvegag 1 mm430a2mmensgcdf 1 mm430ammrefseqcdf 1 mm430ammugprobe 1 mm430ammvegagcdf 1 mm430bmmvegag 1 mm74av1mmensecdf 1 mm74av2mmenstprobe 1 mm74av2mmvegagcdf 1 mm74bv2mmentrezg 1 vvgrapevvtigr 1 mmex10stv1mmense 1 mmex10stv1mmensg 1 hsex10stv2ptentrezgcdf 1 illuminaMousev2ProbeID.db 1 mamurhesusmamurefseq 1 MeSH.Eco.O157.H7.Sakai.eg.db 4 MeSH.Sau.Mu50.eg.db 0 MeSH.Sau.MSSA476.eg.db 0 MeSH.Cal.SC5314.eg.db 4 MeSH.Eco.UTI89.eg.db 0 MeSH.Ddi.AX4.eg.db 4 MeSH.Mtr.eg.db 4 BSgenome.Hsapiens.UCSC.hg38.masked 193 MeSH.Ssc.eg.db 3 MeSH.Zma.eg.db 4 zebrafish 1 ygs98 1 xenopuslaevis 1 rnex10stv1rnensg7probe 1 rn34arnug7probe 1 rn230rnug7cdf 1 rn34arnense7cdf 1 rn230rnug7probe 1 rnex10stv1rnrefseq7probe 1 rn230brnentrezg7probe 1 rn34arnrefseq7cdf 1 rn230rnenst7probe 1 rgug4105a 1 hu35ksuba 1 btbovinebtensgprobe 1 hs133ahsenst 1 mm74av2mmenseprobe 1 hs133bptensecdf 1 rn34arnensg 1 hsfocushsvegaecdf 1 hs133bptensgprobe 1 mm11ksubammensecdf 1 mm430mmentrezgprobe 1 mm430ammvegagprobe 1 MeSH.Sau.M013.eg.db 0 MeSH.Sau.VC40.eg.db 0 mm11ksubammense7cdf 1 mm11ksubammentrezg7cdf 1 mm11ksubbmmense7probe 1 mm11ksubbmmensg7probe 1 mm11ksubbmmug7cdf 1 mm11ksubbmmug7probe 1 mm430ammenst7probe 1 mm430bmmense7cdf 1 mm74av1mmenst7cdf 1 mm74av1mmentrezg7probe 1 mmex10stv1mmentrezg7probe 1 ggchickenggrefseq7cdf 1 osriceostigr7cdf 1 hs133xhsug 1 hs133xptenstprobe 1 hs133xptentrezgcdf 1 hs95av2hsentrezgprobe 1 hs95av2ptentrezgprobe 1 hsex10stv2hsug 1 btbovinebtenseprobe 1 celhomology 1 cfcanine2cfensgprobe 1 cfcanine2cfug 1 cfcanine2cfvegatcdf 1 dmdrosophila2dmensg 1 dmdrosophila2dmugcdf 1 dmgenome1dmensgcdf 1 drosgenome1 1 drzebrafishdrensecdf 1 drzebrafishdrenseprobe 1 ggchickenggentrezgcdf 1 ggchickenggrefseq 1 hgug4111a 1 hs133ahsug 1 hs133ahsugcdf 1 hs133ahsvegatcdf 1 hs133aptenstcdf 1 hs133av2hsrefseqprobe 1 hsex10stv2hsense7probe 1 hsex10stv2hsensg7cdf 1 hsfocusptensg7cdf 1 mgu74bv2 1 mgu74c 1 mm11ksubammenseprobe 1 mm11ksubbmmrefseqprobe 1 mm24kresogen 1 mm430ammensecdf 1 rn230arnentrezg 1 rn230brnensgprobe 1 rn230rnentrezgcdf 1 rn34arnenst 1 rnex10stv1rnensecdf 1 rnex10stv1rnrefseq 1 hs133ahsensg7probe 1 hs133ahsug7cdf 1 hs133aptensg7probe 1 hs133av2hsenst7probe 1 hs133av2hsentrezg7cdf 1 hs133av2hsug7probe 1 hs133bhsentrezg7cdf 1 hs133bhsrefseq7probe 1 hs95av2hsense7probe 1 hs133av2ptentrezgprobe 1 hs133bhsensecdf 1 hs133phsensg 1 hs133xhsensgcdf 1 rnex10stv1rnrefseqprobe 1 rnex10stv1rnugcdf 1 int.intact.db 1 org.Mm.sp.db 1 hsfocushsrefseq 1 mm74cv2mmvegae 1 mm430ammenseprobe 1 hsfocusptensg 1 mm74av2mmvegaeprobe 1 hsfocushsvegagcdf 1 mm74cv2mmrefseqprobe 1 hsfocushsrefseqcdf 1 mamurhesusmamuense 1 mm430bmmvegagcdf 1 hs133av2hsvegatcdf 1 mamurhesusmamuug 1 mm430bmmentrezgcdf 1 mm74av1mmvegaeprobe 1 mm74av2mmentrezgprobe 1 mm74av1mmrefseqcdf 1 mm430a2mmenseprobe 1 mm74bv2mmrefseqcdf 1 mm74av2mmvegatprobe 1 mm430a2mmvegatcdf 1 mm74bv2mmenstprobe 1 mm430bmmugprobe 1 hs133av2hsvegag 1 hs133bhsvegae 1 hs133phsvegaecdf 1 hs133phsvegaeprobe 1 hs133phsvegag 1 hs133phsvegat 1 mmex10stv1mmenstprobe 1 mmex10stv1mmentrezg 1 mmex10stv1mmentrezgcdf 1 mmex10stv1mmug 1 mmex10stv1mmugprobe 1 hs133xhsvegatcdf 1 hs133xptrefseqcdf 1 hsfocushsenseprobe 1 hsfocushsenstprobe 1 hsfocushsvegae 1 hsfocusptensgprobe 1 hsfocusptenstprobe 1 hsfocusptentrezgcdf 1 mamurhesusmamuensg 1 mamurhesusmamuentrezgcdf 1 mm11ksubbmmvegae 1 mm11ksubbmmvegagprobe 1 mm430a2mmentrezg 1 mm430a2mmentrezgcdf 1 mm430ammenstcdf 1 mm430mmvegatprobe 1 mm74av1mmensgcdf 1 mm74av1mmvegae 1 mm74av2mmvegag 1 mm74bv2mmvegaeprobe 1 mm74cv2mmensg 1 mm74cv2mmvegagcdf 1 mm74cv2mmvegatprobe 1 ath1attigr7cdf 1 hsex10stv2ptenst 1 hsex10stv2ptentrezg 1 illuminaMousev1p1ProbeID.db 1 mamurhesusmamurefseqprobe 1 BSgenome.Hsapiens.UCSC.hg38 3686 MeSH.Eco.O157.H7.TW14359.eg.db 0 MeSH.Oni.eg.db 4 MeSH.Dme.eg.db 4 MeSH.Eco.HS.eg.db 1 MeSH.Bsu.W23.eg.db 0 MeSH.Cfa.eg.db 4 MeSH.Bsu.TUB10.eg.db 2 MeSH.Eco.SMS35.eg.db 0 MeSH.Eco.O26.H11.11368.eg.db 0 MeSH.Eco.S88.eg.db 2 MeSH.Dya.eg.db 4 MeSH.Tgo.ME49.eg.db 4 phastCons7way.UCSC.hg38 51 TxDb.Athaliana.BioMart.plantsmart25 17 EnsDb.Rnorvegicus.v75 16 EnsDb.Hsapiens.v79 340 MafDb.ALL.wgs.phase3.release.v5a.20130502 1 SNPlocs.Hsapiens.dbSNP144.GRCh37 926 greengenes13.5MgDb 3 spohomology 1 vvgrapevvtigr7cdf 1 rn230rnense7probe 1 rn230brnrefseq7cdf 1 rn34arnensg7cdf 1 rn230arnentrezg7probe 1 rn230arnensg7probe 1 prt440acdf 1 prt440scdf 1 mm430a2mmrefseqcdf 1 mgrhomology 1 hcg110 1 rn230arnensgcdf 1 hsfocusptenst 1 h10kcod 1 MeSH.Sau.MW2.eg.db 0 mm11ksubammentrezg7probe 1 mm11ksubammug7probe 1 mm11ksubbmmenst7cdf 1 mm430ammensg7cdf 1 mm430bmmentrezg7probe 1 mm430bmmug7probe 1 mm430mmenst7probe 1 mm74av1mmentrezg7cdf 1 mm74av2mmentrezg7probe 1 mmex10stv1mmug7cdf 1 atgenomeatrefseqcdf 1 atgenomeattigrcdf 1 ath1attigrprobe 1 ggchickenggense7probe 1 ggchickenggug7cdf 1 mu19ksuba 1 mu19ksubc 1 hs133xhsentrezg 1 hs133xhsentrezgcdf 1 hs133xhsrefseq 1 hs133xhsrefseqprobe 1 hs133xhsugcdf 1 hs133xhsugprobe 1 hs133xptensgcdf 1 hs133xptentrezg 1 hs95av2hsugprobe 1 hs95av2ptenseprobe 1 hsex10stv2hsenst 1 btbovinebtrefseq 1 cfcanine2cfenseprobe 1 cfcanine2cfensgcdf 1 cfcanine2cfenst 1 cfcanine2cfenstcdf 1 cfcanine2cfentrezgcdf 1 chicken 1 dmgenome1dmug 1 drzebrafishdrenst 1 drzebrafishdrenstcdf 1 drzebrafishdrentrezgcdf 1 drzebrafishdrrefseqprobe 1 ggchickenggenseprobe 1 ggchickenggrefseqcdf 1 ggchickenggrefseqprobe 1 hgug4101a 1 hgug4110b 1 hs133ahsensg 1 hs133ahsrefseq 1 hs133ahsvegag 1 hs133aptense 1 hs133aptenseprobe 1 hs133aptenst 1 hs133aptrefseq 1 hs133aptrefseqprobe 1 hs133av2hsensecdf 1 hs133av2hsensgcdf 1 hs133av2hsrefseq 1 hs133av2hsvegaecdf 1 hsex10stv2ptense7cdf 1 hsfocushsense7cdf 1 mgu74cv2 1 mm11ksubammense 1 mm11ksubammenst 1 mm11ksubbmmense 1 mm11ksubbmmenseprobe 1 mm11ksubbmmensg 1 mm11ksubbmmenstprobe 1 mm11ksubbmmentrezg 1 mm11ksubbmmugprobe 1 mm430ammense 1 rn230arnug 1 rn230brnensg 1 rn230rnense 1 rn230rnenstcdf 1 rn34arnense 1 rn34arnrefseqprobe 1 rnex10stv1rnense 1 rnex10stv1rnensg 1 rnex10stv1rnensgprobe 1 rnex10stv1rnentrezgcdf 1 dmdrosophila2dmensg7cdf 1 cfcanine2cfentrezg7cdf 1 cfcanine2cfrefseq7probe 1 cfcanine2cfug7probe 1 drzebrafishdrensg7probe 1 hs133ahsense7probe 1 hs133bhsensg7cdf 1 hs133bhsensg7probe 1 hs133bptense7cdf 1 hs133xhsentrezg7cdf 1 hs133xhsrefseq7cdf 1 hs133av2ptenstcdf 1 hs133bhsenstprobe 1 hs133bptense 1 hs133bptenstcdf 1 hs133phsugprobe 1 hs133pptentrezg 1 hs133xhsensgprobe 1 hs133xhsenst 1 rnex10stv1rnugprobe 1 org.Mm.ref.db 1 org.Mm.ipi.db 1 mm430a2mmense 1 mm74cv2mmentrezgprobe 1 mm430a2mmenstcdf 1 mm74cv2mmenstcdf 1 mm430bmmvegae 1 mm430bmmrefseq 1 mm430a2mmvegat 1 hsfocushsensgcdf 1 mm430bmmvegatcdf 1 mm430bmmentrezgprobe 1 mm430mmrefseq 1 mm74av2mmensg 1 mm74cv2mmrefseqcdf 1 hs133bhsvegatprobe 1 mm74bv2mmensecdf 1 BSgenome.Tguttata.UCSC.taeGut2 15 hs133av2ptenseprobe 1 mm430mmenst 1 mm430mmentrezg 1 mm430bmmvegaeprobe 1 mamurhesusmamurefseqcdf 1 hs133av2ptensecdf 1 hs133bhsvegaeprobe 1 hs133bptrefseqcdf 1 hs133phsvegagcdf 1 hs133phsvegagprobe 1 rn230arnenseprobe 1 mmex10stv1mmensgprobe 1 mmex10stv1mmenstcdf 1 mmex10stv1mmrefseqprobe 1 mmex10stv1mmugcdf 1 hs133pptrefseqprobe 1 hs95av2hsvegae 1 hs95av2hsvegaeprobe 1 hs95av2hsvegagcdf 1 hs95av2hsvegatprobe 1 hsfocushsentrezgprobe 1 mamurhesusmamuenstprobe 1 mamurhesusmamuentrezg 1 mamurhesusmamuentrezgprobe 1 mm11ksubammvegat 1 mm430a2mmvegag 1 mm430a2mmvegagprobe 1 mm430ammug 1 mm430ammvegat 1 mm430mmensgprobe 1 mm430mmug 1 mm430mmugprobe 1 mm74av1mmenseprobe 1 mm74av2mmense 1 mm74av2mmvegae 1 mm74av2mmvegatcdf 1 mm74cv2mmenstprobe 1 mm74cv2mmvegaecdf 1 mm74cv2mmvegatcdf 1 atgenomeatrefseq7cdf 1 cfcanine2cfense7probe 1 osriceostigrprobe 1 MeSH.Eco.O157.H7.EDL933.eg.db 2 MeSH.Sau.Mu3.eg.db 0 MeSH.Mdo.eg.db 3 MeSH.Ani.FGSC.eg.db 3 MeSH.Bfl.eg.db 4 MeSH.Bsu.RONN1.eg.db 0 MeSH.Eco.SE11.eg.db 0 MeSH.Ame.eg.db 4 MeSH.Eco.CFT073.eg.db 1 MeSH.Oan.eg.db 3 MeSH.Cre.eg.db 4 MeSH.Mmu.eg.db 4 MeSH.Miy.eg.db 4 LowMACAAnnotation 25 MeSH.Sce.S288c.eg.db 3 BSgenome.Btaurus.UCSC.bosTau8 25 ath1atrefseq7probe 1 hcgi12k 1 rnex10stv1rnrefseq7cdf 1 rn34arnentrezg7cdf 1 rnex10stv1rnug7probe 1 rnex10stv1rnensg7cdf 1 rn34arnentrezg7probe 1 rn230brnensg7cdf 1 rn230brnug7cdf 1 rn230arnenst7cdf 1 rn230arnug7probe 1 hsfocusptensgcdf 1 hs133phsentrezgprobe 1 hs133av2ptentrezg 1 hsfocushsensg 1 hsfocusptenstcdf 1 mu11ksuba 1 ath1attigr7probe 1 mm430ammensg7probe 1 mm430ammentrezg7probe 1 mm430mmense7probe 1 mm430mmensg7probe 1 mm74av1mmensg7probe 1 mm74av1mmrefseq7cdf 1 mm74av2mmentrezg7cdf 1 mm74av2mmrefseq7probe 1 mm74av2mmug7probe 1 mmex10stv1mmenst7probe 1 atgenomeattairprobe 1 drzebrafishdrrefseq7probe 1 drzebrafishdrug7probe 1 mu11ksubb 1 omyhomology 1 osahomology 1 pfahomology 1 hs133xptenseprobe 1 hs133xptensg 1 hs133xptenst 1 hs133xptenstcdf 1 hs95av2hsenst 1 hs95av2hsenstprobe 1 hs95av2hsugcdf 1 hs95av2ptensecdf 1 hsex10stv2hsensgprobe 1 hsex10stv2hsenstcdf 1 btbovinebtensecdf 1 btbovinebtentrezgcdf 1 cfcanine2cfensecdf 1 dmdrosophila2dmensgcdf 1 dmdrosophila2dmenstcdf 1 dmdrosophila2dmenstprobe 1 dmgenome1dmensecdf 1 dmgenome1dmenstcdf 1 drzebrafishdrensg 1 drzebrafishdrvegatcdf 1 drzebrafishdrvegatprobe 1 ggchickenggenst 1 ggchickenggugprobe 1 hgubeta7 1 hgug4112a 1 hs133ahsenstprobe 1 hs133ahsvegae 1 hs133ahsvegagcdf 1 hs133ahsvegatprobe 1 hs133aptensecdf 1 hs133aptentrezgcdf 1 hs133av2hsensgprobe 1 HsapiensGenome.hg18 1 hsex10stv2ptense7probe 1 hsfocushsentrezg7probe 1 hsfocusptensg7probe 1 hu35ksubd 1 mgu74a 1 mgu74b 1 mm11ksubammensg 1 mm11ksubammenstprobe 1 mm11ksubbmmrefseq 1 rn230arnentrezgcdf 1 rn230arnugcdf 1 rn230brnensecdf 1 rn230brnentrezgcdf 1 rn230brnug 1 rn230rnenseprobe 1 rn230rnensg 1 rn230rnensgcdf 1 rn230rnrefseqcdf 1 rn34arnentrezg 1 rnex10stv1rnenseprobe 1 rnex10stv1rnrefseqcdf 1 dmdrosophila2dmrefseq7probe 1 DmelanogasterGenome.dm2 1 hs133ahsensg7cdf 1 hs133aptensg7cdf 1 hs133av2ptense7probe 1 hs133bhsenst7probe 1 hs133bhsug7cdf 1 hs133xhsensg7cdf 1 hs95av2hsense7cdf 1 hs95av2hsensg7probe 1 hs95av2ptense7probe 1 hs133bptensg 1 hs133bptenst 1 hs133bptentrezgcdf 1 hs133phsensecdf 1 hs133phsenstcdf 1 hs133phsrefseqcdf 1 hs133pptentrezgcdf 1 hs133xhsensg 1 hs133xhsenstcdf 1 int.domine.db 1 org.Rn.cross.db 1 mm74cv2mmvegaeprobe 1 rn230arnense 1 mm11ksubbmmvegatprobe 1 hsfocushsugprobe 1 hs133av2hsvegatprobe 1 mm430mmvegaecdf 1 mm74cv2mmug 1 hs133phsvegatprobe 1 mm430mmvegaeprobe 1 mm430ammvegatprobe 1 mm74av1mmvegagprobe 1 mm74av2mmrefseqcdf 1 osriceosrefseqcdf 1 mm430a2mmenst 1 mm430ammensg 1 mm430ammensgcdf 1 mm430bmmentrezg 1 mm74av1mmenst 1 mm430bmmensg 1 mamurhesusmamuenstcdf 1 hs133bhsvegag 1 hs133bhsvegagcdf 1 hs133bhsvegatcdf 1 mmex10stv1mmrefseqcdf 1 hs95av2hsvegag 1 hs95av2ptrefseq 1 hs95av2ptrefseqcdf 1 hsfocusptentrezgprobe 1 hsfocusptrefseqcdf 1 HuO22 1 mm11ksubbmmvegaeprobe 1 mm430a2mmensgprobe 1 mm430a2mmentrezgprobe 1 mm430ammentrezgprobe 1 mm430ammvegag 1 mm430mmvegag 1 mm74av1mmvegagcdf 1 mm74av1mmvegatprobe 1 mm74bv2mmvegae 1 mm74bv2mmvegagprobe 1 mm74bv2mmvegatprobe 1 Mu15v1 1 Mu22v3 1 ath1atrefseq7cdf 1 hsex10stv2hsugprobe 1 mmex10stv1mmenseprobe 1 mmex10stv1mmensgcdf 1 hsex10stv2ptenseprobe 1 illuminaHumanv1ProbeID.db 1 illuminaMousev1ProbeID.db 1 TxDb.Celegans.UCSC.ce11.refGene 43 alternativeSplicingEvents.hg19 18 fitCons.UCSC.hg19 17 hta20transcriptcluster.db 43 BSgenome.Ggallus.UCSC.galGal5 17 clariomshumanhttranscriptcluster.db 22 pd.clariom.s.rat.ht 21 LymphoSeqDB 122 MafDb.ExAC.r0.3.1.snvs.hs37d5 2 TxDb.Dmelanogaster.UCSC.dm6.ensGene 320 TxDb.Mmulatta.UCSC.rheMac8.refGene 18 IlluminaHumanMethylationEPICanno.ilm10b2.hg19 337 TxDb.Sscrofa.UCSC.susScr3.refGene 14 TxDb.Ggallus.UCSC.galGal4.refGene 17 clariomdhumantranscriptcluster.db 39 pd.clariom.s.human.ht 37 pd.clariom.d.human 67 BSgenome.Vvinifera.URGI.IGGP8X 15 MafDb.ESP6500SI.V2.SSA137.hs37d5 3 hta20probeset.db 22 rta10transcriptcluster.db 15 clariomshumantranscriptcluster.db 30 pd.clariom.s.human 68 pd.clariom.s.mouse 45 TxDb.Rnorvegicus.UCSC.rn6.refGene 139 mta10transcriptcluster.db 17 MafDb.ESP6500SI.V2.SSA137.GRCh38 3 BSgenome.Mmulatta.UCSC.rheMac8 85 clariomsrathttranscriptcluster.db 17 EnsDb.Hsapiens.v86 2647 BSgenome.Celegans.UCSC.ce11 166 MafDb.1Kgenomes.phase3.hs37d5 136 FlowSorted.CordBloodNorway.450k 1 TxDb.Cfamiliaris.UCSC.canFam3.refGene 19 TxDb.Ptroglodytes.UCSC.panTro4.refGene 16 BSgenome.Ptroglodytes.UCSC.panTro5 17 IlluminaHumanMethylation27kanno.ilmn12.hg19 26 clariomdhumanprobeset.db 31 pd.clariom.s.mouse.ht 23 miRBaseVersions.db 133 IlluminaHumanMethylationEPICmanifest 1073 TxDb.Drerio.UCSC.danRer10.refGene 121 MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 2 lumiMouseIDMapping.db 1 clariomsmousetranscriptcluster.db 32 clariomsmousehttranscriptcluster.db 18 TxDb.Btaurus.UCSC.bosTau8.refGene 17 TxDb.Mmulatta.UCSC.rheMac3.refGene 14 MafDb.1Kgenomes.phase1.hs37d5 117 mta10probeset.db 19 rta10probeset.db 15 clariomsrattranscriptcluster.db 18 pd.clariom.s.rat 24 IlluminaHumanMethylationEPICanno.ilm10b4.hg19 1086 MafDb.gnomAD.r2.0.1.hs37d5 3 MafDb.gnomADex.r2.0.1.hs37d5 3 AHCytoBands 15 MafDb.ExAC.r1.0.hs37d5 105 TxDb.Ggallus.UCSC.galGal5.refGene 39 SNPlocs.Hsapiens.dbSNP149.GRCh38 36 IlluminaHumanMethylationEPICanno.ilm10b3.hg19 32 MafDb.ExAC.r1.0.nonTCGA.hs37d5 18 MafDb.TOPMed.freeze5.hg38 19 SNPlocs.Hsapiens.dbSNP150.GRCh38 62 GenomeInfoDbData 51570 AHEnsDbs 22 alternativeSplicingEvents.hg38 20 MafDb.gnomADex.r2.0.1.GRCh38 3 TxDb.Sscrofa.UCSC.susScr11.refGene 23 TxDb.Ptroglodytes.UCSC.panTro5.refGene 14 LRBase.Xtr.eg.db 2 BSgenome.Ptroglodytes.UCSC.panTro6 17 silva128.1MgDb 3 MafDb.1Kgenomes.phase1.GRCh38 19 MafDb.TOPMed.freeze5.hg19 19 MafDb.gnomAD.r2.1.hs37d5 31 ribosomaldatabaseproject11.5MgDb 3 MafDb.gnomAD.r2.0.1.GRCh38 3 MafDb.ExAC.r1.0.nonTCGA.GRCh38 22 MafDb.1Kgenomes.phase3.GRCh38 57 SNPlocs.Hsapiens.dbSNP151.GRCh38 12 BSgenome.Sscrofa.UCSC.susScr11 36 LRBase.Ssc.eg.db 3 LRBase.Hsa.eg.db 3 LRBase.Pab.eg.db 3 BSgenome.Aofficinalis.NCBI.V1 17 LRBase.Dme.eg.db 3 LRBase.Gga.eg.db 3 org.hs.eg.db 1 MafDb.gnomADex.r2.1.hs37d5 105 LRBase.Rno.eg.db 2 LRBase.Dre.eg.db 3 LRBase.Bta.eg.db 3 JASPAR2018 425 geneplast.data.string.v91 32 LRBase.Cel.eg.db 2 LRBase.Ath.eg.db 3 LRBase.Mmu.eg.db 3 BSgenome.Carietinum.NCBI.v1 17 EuPathDB 21 MafDb.ExAC.r1.0.GRCh38 17 org.Mxanthus.db 26 hpAnnot 17 MafDb.gnomAD.r2.1.GRCh38 31 MafDb.gnomAD.r3.0.GRCh38 3 BSgenome.Cjacchus.UCSC.calJac3 17 MafDb.gnomADex.r2.1.GRCh38 16 BSgenome.Mdomestica.UCSC.monDom5 16 TxDb.Btaurus.UCSC.bosTau9.refGene 23 TxDb.Ggallus.UCSC.galGal6.refGene 20 BSgenome.Drerio.UCSC.danRer11 63 BSgenome.Ggallus.UCSC.galGal6 33 TxDb.Celegans.UCSC.ce11.ensGene 147 TxDb.Drerio.UCSC.danRer11.refGene 30 ENCODExplorerData 25 GenomicState 97 TxDb.Ptroglodytes.UCSC.panTro6.refGene 14 TxDb.Mmulatta.UCSC.rheMac10.refGene 100 BSgenome.Mmulatta.UCSC.rheMac10 152 BSgenome.Btaurus.UCSC.bosTau9 36 rat2302frmavecs 16 go.db 1 JASPAR2020 1307 EpiTxDb.Hs.hg38 60 CellMixS 0 ChAMP 1 BSgenome.Amellifera.NCBI.AmelHAv3.1 17 affy 1 Biobase 7 BiocParallel 19 BSgenome 2 genefilter 1 GenomeGraphs 0 IRanges 19 parallel 0 Ringo 0 tcltk 0 MafH5.gnomAD.r3.0.GRCh38 2 EpiTxDb.Mm.mm10 16 facets 0 CancerSubtypes 0 CEMiTool 0 rlang 345 base 0 seqCAT 0 muscat 1 AnnotationDbi 23 GenomicFeatures 11 grDevices 0 Gviz 1 interactiveDisplayBase 1 preprocessCore 1 Rgraphviz 1 BSgenome.Dvirilis.Ensembl.dvircaf1 14 phastCons30way.UCSC.hg38 15 BSgenome.Ppaniscus.UCSC.panPan1 15 vcfR 1 BiocWorkflowTools 0 BiocSklearn 0 TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq 14 limma 97 annotate 2 datasets 0 DESeq 0 gdsfmt 1 grid 1 coMET 0 Rsamtools 4 SeqVarTools 0 stats 0 EpiTxDb.Sc.sacCer3 16 BSgenome.Ppaniscus.UCSC.panPan2 22 ATACseqQC 1 cliqueMS 1 synergyfinder 0 tradeSeq 1 DEXICA 0 biovizBase 1 DESeq2 3 SeqArray 1 zlibbioc 2 metaboliteIDmapping 158 CATALYST 1 universalmotif 0 TxDb.Mmusculus.UCSC.mm39.refGene 123 biomaRt 2 string 1 methods 0 multtest 1 cummeRbund 0 geneplotter 1 tools 0 utils 0 vsn 1 ggtree 13 geneplast.data 41 S4Vectors 11 GenomeInfoDb 19 BSgenome.Creinhardtii.JGI.v5.6 18 rstudio 0 sitePath 0 KEGGREST 10 affyio 1 compiler 0 GenomicAlignments 2 GenomicRanges 4 KEGGgraph 1 geneLenDataBase 10 NOISeq 0 splines 0 stats4 0 SummarizedExperiment 3 VariantAnnotation 1 BANDITS 0 CluMSID 0 waddR 0 BiocGenerics 28 MeSH.Eca.eg.db 1 AnnotationHub 2 DNAcopy 0 edgeR 10 ensembldb 1 graph 1 graphics 0 rtracklayer 1 BiocInstaller 1 Biostrings 15 gage 0 pathview 1 XVector 2 AHMeSHDbs 26 BSgenome.Mmusculus.UCSC.mm39 102 AHWikipathwaysDbs 17 htrat230pm.db 15 Orthology.eg.db 88 htmg430a.db 15 TxDb.Cfamiliaris.UCSC.canFam4.refGene 13 ichorCNA 0 chromhmmData 62 htmg430pm.db 16 excluderanges 105 hthgu133pluspm.db 21 TxDb.Rnorvegicus.UCSC.rn7.refGene 110 kegg.db 0 scAnnotatR.models 13 AHPubMedDbs 23 AHPathbankDbs 18 hthgu133plusb.db 14 BSgenome.Rnorvegicus.UCSC.rn7 113 gwascatData 13 CTCF 23 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor 21 synaptome.data 40 karyoploteR 1 htmg430b.db 14 TxDb.Hsapiens.UCSC.hg38.refGene 74 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major 25 GeneSummary 35 ontoProcData 15 synaptome.db 33 u 0 KaryoploteR 0 MafH5.gnomAD.v3.1.1.GRCh38 11 AHLRBaseDbs 21 rGenomeTracksData 51 hthgu133plusa.db 14 TxDb.Cfamiliaris.UCSC.canFam5.refGene 11 TxDb.Athaliana.BioMart.plantsmart51 28 htratfocus.db 14 p 0 devtools 46 BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 43 globals 41 susieR 18 tidytree 47 amgen.okta.client 1 sparklyr 11 htmltools 318 HDO.db 13055 brms 1 collections 1 Exact 1 bookdown 37 evaluate 335 dotCall64 8 dtw 1 ggsignif 11 fork 1 gtable 174 future.apply 114 Matrix 317 lgr 1 padr 1 pins 39 pkgcache 9 paletteer 5 network 2 recipes 69 Runuran 1 shinySelect 0 spaMM 1 riskRegression 2 esquisse 2 terra 60 visNetwork 4 webshot 34 spatialreg 1 odbc 22 packrat 43 paws.security.identity 17 paws.cost.management 17 bigassertr 1 bigrquery 15 ipred 45 coloc 16 reshape 3 plyr 154 hexbin 15 uwot 47 findpython 10 bayesplot 10 here 2 klaR 2 subselect 1 superpc 1 RcppAnnoy 52 bench 1 bpcp 1 hdrcde 6 colorRamps 10 CBPS 1 MASS 238 MCMCglmm 1 MCMCpack 2 FlowSorted.CordBloodCombined.450k 9 ccdata 9 lsa 8 memoise 17 Markdown 0 BiocManager 184 GMD 0 rpart 85 checkmate 147 expm 19 HDF5Array 10 pkgload 232 restfulr 17 waiter 10 curatedMetagenomicData 0 Rsolnp 2 samr 5 rj.gd 0 formatters 2 geosphere 11 sticky 1 raster 50 polysat 0 aplot 36 RPostgres 20 batchelor 1 rsconnect 70 MALDIquant 3 spam 5 spatstat.utils 33 enrichR 2 shinyalert 1 xaringanExtra 1 AgiMicroRna 0 dada2 1 illuminaio 1 limmaGUI 0 AnVIL 0 gWidgets2tcltk 0 s2 70 beachmat 2 GENESIS 0 scran 1 dupRadar 0 SNPRelate 1 sva 1 leaps 1 rJava 39 extraTrees 0 enc 0 RAthena 10 rematch2 1 SparseM 3 rhdf5filters 2 units 74 proj4 18 future.callr 4 qqconf 9 R.rsp 1 kpmt 0 xaringanthemer 1 dittodb 1 webmockr 1 gamlss.dist 3 ggPMX 1 jsTreeR 1 ipaddress 1 interp 15 randtoolbox 1 pmtables 1 partitions 1 reda 1 Rsmlx 1 fracdiff 3 quarto 5 keyring 6 servr 4 rvg 2 doRNG 4 npde 1 purr 0 hms 115 furrr 18 SNPlocs.Hsapiens.dbSNP155.GRCh38 541 brew 71 epiR 3 forecast 5 doBy 1 conquer 2 desc 131 lpSolveAPI 1 NMdata 1 dtwclust 1 h2o 4 languageserver 2 memisc 1 pagedown 1 gridtext 2 openssl 311 pdftools 9 pointblank 1 PKNCA 1 readr 105 pkgdepends 10 smoothHR 0 sensitivity 1 nonmemica 1 wk 72 stringdist 20 tracee 1 ucminf 2 tfruns 13 writexl 12 yardstick 16 tidyr 139 tweenr 16 mlbench 10 paws.storage 52 multcomp 40 shape 32 RColorBrewer 17 Cubist 1 scales 118 knitr 272 htmlwidgets 244 highr 66 npsurv 1 plotly 156 bigreadr 0 VGAM 13 sparsesvd 18 survMisc 2 formatR 59 circlize 31 fansi 254 mice 13 blob 104 ggpointdensity 6 blme 6 Illumina450ProbeVariants.db 0 singleCellTK 1 NADA 5 truncnorm 5 Rfast 16 isva 5 randomcoloR 5 agricolae 6 Signac 11 docopt 6 cxAnalysis 0 phyloP35way.UCSC.mm39 13 Rcgmin 1 SuperLearner 1 Rdpack 47 asht 1 perm 7 gplots 62 bit64 12 bit 58 R.devices 8 codetools 66 rngtools 2 phastCons35way.UCSC.mm39 13 sfsmisc 3 HandTill2001 1 roxygen2 98 N2R 0 tidyjson 0 lares 1 rpart.plot 2 RcppParallel 16 gsmoothr 5 clusterprofielr 0 ncdf4 9 EBImage 1 qcNvs 0 MAST 1 SingleCellExperiment 10 GLAD 1 rrBLUP 1 clusthaplo 0 bigmemory 1 biganalytics 1 bezier 1 forestplot 1 sp 100 clusterProfiler 3 rcdk 10 statmod 16 remotes 94 sessioninfo 30 spatstat.geom 44 FNN 76 assertive.properties 11 shinyjs 6 msigdbr 3 Mfuzz 0 GlobalAncova 0 fgsea 1 polyester 0 GeneticsPed 0 gsrc 0 ASExtras4 0 nloptr 43 sjPlot 1 BiocSingular 2 GSVA 1 IHW 1 goseq 0 ReportingTools 0 annaffy 0 MSnbase 1 AnnotationForge 1 BMA 1 plotmo 1 xmlparsedata 1 loo 10 corpcor 2 RandomFields 0 RandomFieldsUtils 0 r2d3 1 shinycssloaders 1 pkgconfig 3 imcRtools 0 BiasedUrn 12 polspline 3 RobustRankAggreg 0 FactoMineR 42 DOSE 2 JADE 1 stringfish 9 rtkore 1 deSolve 37 campsismod 1 evd 1 precommit 1 rclipboard 5 prismatic 1 rhub 3 profile 0 vaultr 1 HiCBricks 0 huxtable 2 nlmixr2data 1 ks 7 rxode2et 1 timereg 1 timechange 76 vcr 1 mclogit 1 rngWELL 1 UCSCRepeatMasker 17 JASPAR2022 265 broom 103 gmp 14 reticulate 58 posterior 10 callr 129 caret 46 gert 61 rvest 60 vctrs 324 sass 258 foreign 50 distributional 12 data.table 201 BBmisc 1 iml 0 dparser 1 Brobdingnag 1 insight 7 ggRandomForests 0 mrgmisc 1 progressr 56 mapbayr 1 osqp 2 ggraph 12 RefManageR 1 rstan 11 templater 1 workflows 11 flexclust 1 segmented 16 optparse 43 paws 17 paws.compute 17 bigparallelr 1 brglm 1 ps 248 libcoin 3 ape 20 lsei 1 ica 15 rsvd 10 tsne 1 ivpack 0 km.ci 2 kernlab 5 farver 37 Rcpp 271 openxlsx 25 brave 1 fds 5 xgboost 52 Ckmeans.1d.dp 1 NeuralNetTools 1 GWASExactHW 5 shinypanel 7 WGCNA 12 RcppTOML 28 bdsmatrix 7 Bioconductor 1 shinyFiles 12 ade4 4 cluster 91 prettyunits 159 magrittr 31 R.filesets 8 dendextend 50 randomForest 3 ModelMetrics 1 rapportools 2 expss 6 FRASER 0 Rhdf5lib 3 ALL 10 minpack.lm 3 shinyhelper 5 GeomxTools 0 mutoss 9 adegenet 1 graphql 1 httptest 9 Matching 1 dae 1 shadowtext 16 scater 1 png 52 R.cache 2 decoupleR 1 Rtsne 28 rex 35 maps 11 spatstat.sparse 33 quantreg 76 dbscan 5 pdist 1 BiocIO 1 sm 1 gcrma 0 affycoretools 0 derfinderHelper 0 tximport 1 HDInterval 10 motifmatchr 1 bumphunter 1 DropletUtils 1 widgetTools 1 Category 1 derfinder 0 CGHbase 0 genoset 0 minfi 1 LEA 1 emdbook 9 flexmix 1 logistf 10 microbenchmark 1 config 20 ddalpha 1 git2r 33 rstanarm 1 shinythemes 2 ISwR 1 pwr 1 pingr 10 pool 5 RClickhouse 1 ggstatsplot 2 phyclust 1 rms 3 AUCell 1 qs 9 emayili 1 dockerfiler 1 drake 9 gld 1 ggdag 1 mlr3 2 palmerpenguins 1 sf 62 rticles 1 pheatmap 1 BSgenome.Hsapiens.UCSC.mm10 0 cubelyr 0 eha 1 mrgvalprep 1 gap 1 bigD 1 RcppDE 1 tidyvpc 1 RApiDatetime 1 slickR 0 survivalROC 1 nlmixr2est 1 modelenv 1 BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 15 dtplyr 50 httr 232 readxl 88 ggplot2 272 dplyr 293 datawizard 5 digest 305 bayestestR 3 collapse 1 commonmark 155 graphlayouts 40 gsDesign 1 fixest 1 lintr 40 JuliaCall 0 mlr 1 duckdb 2 minqa 88 nnet 80 gargle 85 projpred 1 purrr 172 RCurl 164 ragg 119 party 2 renv 172 igraph 151 rgl 4 scam 1 rstpm2 1 tune 12 tinytex 277 scatterplot3d 41 webfakes 1 vegan 4 testthat 256 ComplexHeatmap 11 BSgenome.Gmax.NCBI.Gmv40 17 BSgenome.Cjacchus.UCSC.calJac4 33 SNPlocs.Hsapiens.dbSNP155.GRCh37 763 modelr 51 pamr 1 pander 3 pryr 10 processx 255 gower 13 modeltools 1 locfit 87 fitdistrplus 30 StanHeaders 11 styler 66 generics 40 snow 17 iterators 8 C50 1 Lahman 1 ParamHelpers 0 RcppZiggurat 6 RcppHNSW 37 pRolocdata 10 mixsqp 18 TSP 26 egg 5 NMF 12 reldist 8 RWiener 1 aldvmm 1 DBI 157 ellipsis 15 aroma.core 8 utf8 241 dichromat 6 robustbase 27 e1071 54 inum 3 dimRed 1 ggfun 41 patchwork 70 SeuratObject 41 shiny 222 RcppEigen 138 fontawesome 127 admisc 29 Matrix.utils 7 gaston 1 SingleCelLExperiment 0 filelock 58 aws.s3 6 ash 6 rj 0 crrri 0 DelayedArray 5 org.mm.eg.db 1 pcaMethods 1 superheat 1 ggExtra 5 lixoftConnectors.2 0 datapipeline 1 fields 5 spatstat.core 24 cachem 160 babelgene 3 benchmarkme 1 magick 14 spatial 44 globaltest 0 quantsmooth 1 mzR 1 ggbio 0 MassSpecWavelet 1 ShortRead 1 AnnotationFilter 1 ALDEx2 1 tidygraph 27 XVectorb 0 flowWorkspaceData 1 phyloseq 1 mzID 0 GWASTools 0 DynDoc 1 DeconRNASeq 0 RNASeqPower 0 DEoptimR 26 mclust 14 conflicted 12 RcppProgress 1 pscl 2 castor 1 fastmap 77 ndexr 0 SBGNview.data 0 BSgenome.Hsapiens.UCSC.hg1 0 promises 143 Peptides 1 infercnv 1 dittoSeq 1 apcluster 1 multidplyr 0 clock 28 cobalt 2 ymlthis 0 nleqslv 1 lbfgs 1 RApiSerialize 6 saemix 1 tidyposterior 1 TMB 33 nanostringr 1 genefu 0 ggbeeswarm 18 DEoptim 1 GPArotation 34 jpeg 13 juicyjuice 1 nanotime 1 rmutil 0 nlmixr2lib 1 gamlss 3 log4r 3 msm 6 NMcalc 1 XLConnect 1 MafH5.gnomAD.v3.1.2.GRCh38 37 scidb 1 paws.common 54 sn 11 cli 238 glue 106 car 52 cem 1 datamods 6 cpp11 207 gghighlight 1 crayon 109 DT 218 lifecycle 191 broom.helpers 4 chron 4 ggtext 2 future 148 matrixcalc 1 lpSolve 16 nhanesA 1 mets 1 rainbow 9 paws.application.integration 17 officer 20 plumber 6 isoband 66 vegawidget 1 timeDate 31 rsvg 3 systemfit 1 yaml 165 xfun 323 targets 8 sys 182 tarchetypes 7 seurat 1 BiocVersion 34 BSgenome.Btaurus.UCSC.bosTau9.masked 15 maptools 19 paws.networking 17 rapidjsonr 1 bigutilsr 1 profileModel 1 lubridate 82 colourpicker 9 rjson 16 GetoptLong 3 viridisLite 146 latticeExtra 12 seqminer 10 leiden 33 metap 9 sctransform 32 dqrng 38 argparse 10 bbmle 9 glmnet 21 geoR 1 splancs 7 glmnetUtils 7 gmodels 2 MatchIt 2 zCompositions 9 shinyBS 10 qlcMatrix 12 PRROC 5 GenABEL 2 arm 1 seqinr 10 idr 0 VennDiagram 1 Formula 15 viridis 158 pkgmaker 2 exactRankTests 2 umap 11 qvalue 1 hwriter 3 weights 2 sandwich 9 Rhtslib 2 MatrixGenerics 3 sccore 1 usethis 101 tzdb 91 scPipe 0 R.huge 5 shinydashboardPlus 8 venn 8 pcaExplorer 0 apeglm 1 qtl 1 ghql 1 safetyexploreR 1 cmdstanr 1 RIdeogram 1 systemfonts 160 goftest 13 deldir 55 VAM 1 class 78 credentials 39 pkgdown 20 textshaping 76 shinyjqui 1 OrganismDbi 1 GenomicFiles 1 SPIA 0 RBGL 1 marray 0 spatstat.random 31 GENIE3 0 siggenes 1 GOstats 1 inline 1 mda 1 whisker 65 spData 15 tidymodels 13 trimcluster 0 RJSONIO 26 SDMTools 1 AER 1 ssh 1 MCPcounter 0 cytolib 1 RMariaDB 6 org.At.eg.db 0 kohonen 2 GOSemSim 1 DRR 1 clinPK 0 Epi 1 flexdashboard 2 xaringan 1 biostatUtil 0 Rd2roxygen 0 variancePartition 1 foghorn 1 mapproj 1 rxode2parse 1 RcppGSL 4 rxode2ll 1 Rook 1 yaImpute 1 bsplus 1 forcats 23 googlesheets4 77 arrow 18 tidyselect 84 dm 1 DBItest 1 httpuv 265 DescTools 18 doMC 2 learnr 6 irlba 31 MatrixModels 104 nlme 206 n1qn1 1 latex2exp 1 performance 5 mnormt 14 parameters 4 polyclip 85 protolite 1 RSEIS 7 rmarkdown 271 gtsummary 3 XML 122 statnet.common 3 zoo 43 ggridges 43 shinyWidgets 85 vroom 175 strucchange 1 paws.machine.learning 17 paws.customer.engagement 17 pbmcapply 1 lava 41 coda 14 labeling 145 cowplot 59 pbapply 53 rly 0 lambda.r 1 matrixStats 185 mime 44 dbplyr 151 GlobalOptions 1 clipr 31 gdata 19 fda 9 OncoBayes2 1 FlowSorted.Blood.EPIC 9 estimability 15 ggdendro 11 qap 11 GenABEL.data 2 RSNNS 0 AsioHeaders 5 lattice 167 KernSmooth 68 tibble 155 SnowballC 4 UniProtKeywords 34 crosstalk 131 lazyeval 21 partykit 3 xml2 214 tidyverse 19 rhdf5 2 DMRcatedata 0 scattermore 34 grr 1 RcppSpdlog 1 poppr 1 aroma.apd 8 aws.signature 5 scrime 5 rARPACK 5 ExomeDepth 1 qtl2 1 qpcR 1 EMMREML 1 aqp 1 asremlPlus 1 jquerylib 2 mixOmics 1 lixoftConnectors.1 0 DelayedMatrixStats 11 scatterpie 19 GEOquery 1 rcdklibs 10 downlit 36 shinytest 2 metagenomeSeq 0 maSigPro 0 BiocNeighbors 2 GSEABase 1 lpsymphony 1 sjstats 1 PhosR 0 slider 21 hdf5r 6 xcms 1 methylumi 0 CAMERA 0 sigaR 0 earth 2 epitools 1 mixtools 1 threejs 1 spls 1 workflowsets 10 pbkrtest 62 jose 1 MutationalPatterns 0 tensorflow 18 progress 77 irr 1 distr 1 blockcluster 1 lhs 10 bbr 1 binr 0 dfidx 1 cubature 1 ggdist 3 ggeffects 2 lavaan 42 lambdr 1 lotri 1 metafor 3 plm 1 spacetime 2 urca 2 scico 1 PerformanceAnalytics 1 tfrmt 1 babelmixr2 1 pmforest 1 nlmixr2 1 reactable 3 badger 0 shinybusy 9 assertr 2 shinyMobile 1 rxode2random 1 sensobol 1 ordinal 2 scuttle 9 flextable 21 treeio 9 haven 94 BSgenome.Mfascicularis.NCBI.6.0 20 ontologyIndex 18 reprex 39 rrcov 16 bslib 270 admiral 1 blogdown 1 crul 13 admiraldev 1 classInt 37 ergm 1 gganimate 1 clue 44 emmeans 93 ggforce 20 golem 5 hunspell 5 gitcreds 19 jsonlite 280 markdown 99 ndjson 0 narray 1 av 1 mrgda 1 modeldata 12 DHARMa 1 qpdf 3 reactlog 1 RSiena 1 RSQLite 174 RMySQL 4 Tplyr 1 xts 14 tseries 5 zip 154 Seurat 54 lme4 139 robust 12 rmio 1 binom 1 xtable 3 Hmisc 31 htmlTable 26 ggrepel 178 TH.data 40 gam 7 slam 3 polynom 4 kableExtra 14 mvtnorm 115 rappdirs 9 CVST 1 waldo 187 diffobj 11 foreach 8 gtools 57 ggnewscale 33 prettydoc 1 metaMA 8 SMVar 8 ggseqlogo 11 TFMPvalue 8 extraDistr 6 seriation 25 RPostgreSQL 3 ATE 1 BlakerCI 1 BH 153 fs 217 caTools 5 backports 56 permute 3 rstudioapi 158 mgcv 250 plotrix 12 ggpubr 22 geometry 1 magic 1 numDeriv 2 survminer 2 assertthat 2 rversions 45 glmmADMB 0 rmdformats 2 R.methodsS3 15 R.oo 48 lmtest 16 pkgbuild 114 leidenAlg 1 fresh 6 shinydashboard 3 googledrive 69 ExploreModelMatrix 0 MultiAssayExperiment 1 PsNR 1 BiocFileCache 4 svglite 29 dendsort 0 lmomco 1 soilDB 1 SPEI 1 lmerTest 1 pegas 1 lixoftConnectors 0 Rsmlx.2 0 flowVS 0 rbibutils 47 ggplotify 30 spatstat.data 32 parsedate 3 proxy 3 later 224 baySeq 7 Rsubread 1 biomformat 1 ballgown 0 viridislite 0 dials 11 leidenbase 17 morpheus 1 tkWidgets 1 lumi 0 Wrench 1 PureCN 0 ProtGenerics 1 oligoClasses 0 ellipse 46 fastGHQuad 1 fastICA 8 covr 51 densityClust 1 shinystan 1 speedglm 1 PKI 1 ROCR 2 RhpcBLASctl 9 SQUAREM 2 carData 3 ranger 13 boot 56 webdriver 1 listenv 50 rgeos 26 rols 0 downloader 1 corrr 1 asciicast 1 flexsurv 1 gmm 2 geepack 5 gnm 1 gt 10 glmmTMB 3 gbm 35 lobstr 3 mrgsolve 1 optmatch 1 RcppCCTZ 1 sortable 6 svd 1 V8 26 cmprsk 1 quadprog 2 askpass 162 bsgenome.hsapiens.ucsc.hg19 1 bs4Dash 10 dlstats 1 changepoint 1 nlmixr2extra 1 rxode2 1 Rcsdp 1 mapdata 1 RsSimulx 1 gettz 1 infer 12 parsnip 13 rsample 23 brio 62 distill 1 bibtex 2 admiral.test 1 curl 360 ggcorrplot 2 labelled 5 httr2 84 gh 58 jomo 1 gee 1 GA 30 psych 76 mlr3misc 2 NMproject 1 pracma 25 pak 2 RSpectra 16 tables 3 RcppArmadillo 223 Rwave 7 Rttf2pt1 3 tictoc 11 pROC 60 paws.database 17 paws.management 17 paws.analytics 17 pls 3 beeswarm 1 fit.models 1 prodlim 57 coin 2 reshape2 9 colorspace 69 stringi 210 withr 233 parallelly 132 sitmo 15 TeachingDemos 1 gtx 0 hardhat 59 selectr 1 questionr 2 pcaPP 15 bitops 13 pillar 155 doParallel 20 Cairo 23 MNP 1 ggthemes 10 poweRlaw 7 heatmaply 18 ChAMPdata 0 WeightIt 1 R6 51 stringr 202 PSCBS 7 R.utils 113 RCircos 0 survival 154 INLA 0 IRkernel 1 rprojroot 164 DMRcate 0 ids 1 mathjaxr 2 dynamicTreeCut 1 uuid 137 hierfstat 0 PreciseSums 1 aroma.affymetrix 8 rstatix 21 forrester.metadata 0 storr 1 mailR 0 crrry 0 biglm 1 nasapower 1 RsSimulx.1 0 survcomp 1 ncdf4.1 0 Rsmlx.1 0 rvcheck 3 base64enc 2 creatr 1 rcmdcheck 30 svMisc 1 ClusterR 1 vaplot 1 SC3 0 DEGseq 0 impute 1 fastmatch 24 MOFA2 0 SSPA 0 yulab.utils 49 fuzzyjoin 1 corrplot 3 rstantools 11 LiblineaR 10 qvcalc 1 rio 8 MeSHDbi 1 oligo 0 mc2d 1 registry 2 diceR 1 clusterCrit 1 RBesT 1 ruv 1 clariomdhumantranscriptcluster 0 coro 1 csv 1 JM 1 mlr3measures 1 NonCompart 1 paradox 1 randomForestSRC 1 shiny.router 1 RItools 1 transformr 1 splines2 1 ccaPP 1 mrgvalidate 1 keras 8 repurrrsive 1 vioplot 1 nlmixr2plot 1 xpose 1 RODBC 3 philentropy 2 modules 5 revealgenomics 2 spdep 9 zeallot 1 eventTrack 1 rpsftm 1 RPushbullet 1 optextras 1 rematch 77 pipeR 1 arsenal 1 fontquiver 1 operator.tools 1 gclus 1 RANN 1 stabs 1 mboost 2 metacore 1 metatools 1 cache 1 chromote 6 base64url 1 diagram 1 CompQuadForm 1 nonnest2 1 optimx 15 xlsxjars 1 chemometrics 1 triebeard 4 getPass 2 LambertW 2 gss 3 MBA 6 timeSeries 7 PossibilityCurves 2 MuMIn 1 clustree 2 ggVennDiagram 2 fdrtool 3 fastDummies 23 tigris 25 intervals 4 AlphaMissense.v2023.hg38 10 uchardet 1 ExplorOMICS 1 argusDS.Studio.permissions 1 elasticsearchr 1 CytoTRACE 1 RcppNumerical 1 dorothea 1 flock 1 RUVseq 0 mosaicCore 30 argusDS.FCUtilities 1 enrichplot 2 littler 1 AIPW 1 getip 1 predint 1 correlation 1 recommenderlab 7 bayesm 9 mcr 8 dream 0 covRNA 0 sysfonts 1 RcmdrMisc 2 readstata13 1 arrayop 1 pan 2 mlr3hyperband 1 intergraph 1 ANCOMBC 1 corpora 1 BiocBaseUtils 1 gWidgets 1 DECIPHER 1 RankAggreg 1 utilsRmd 1 ompr 1 ompr.roi 1 secrets 1 LDheatmap 1 venneuler 1 osprey 1 scda.2021 1 sequenza 1 lemon 2 Linnorm 1 JASPAR2016 1 lfa 1 pagoda2 1 TFBSTools 1 topGO 1 xbioc 1 scclusteval 1 SeuratWrappers 1 singscore 1 SpatialCPie 1 biocViews 1 RNeXML 1 bigsnpr 0 PKPDmodels 1 PMCMRplus 1 azcore 1 distr6 1 param6 1 set6 1 mlr3fselect 1 cgdsr 1 Rqc 1 doFuture 1 splitTools 1 biclust 1 MSstats 1 GUniFrac 2 plantecophys 1 scMerge 1 ASSET 1 stargazer 1 rcompanion 1 psychTools 1 PullReadAnalysisData 1 shinytoastr 1 dplyrb 1 tinytest 1 pd.htXa.2.0 1 ggh4x 2 odyproteomicsValidator 1 truncreg 1 merDeriv 1 modelsummary 1 cAIC4 1 bayesQR 1 geomtextpath 1 doMPI 1 networkD3 1 tclust 1 effects 1 skewt 1 xrf 1 lavaSearch2 1 fTrading 1 sylly.en 1 biglmm 1 skmeans 1 cleanrmd 1 DendSer 1 mvnormtest 1 tfdatasets 1 biglasso 1 wildmeta 1 rcartocolor 1 randomizr 1 reclin 1 PCDimension 1 rmcorr 1 mfx 1 colorfulVennPlot 1 sybil 1 NanoPyx 1 micromap 1 qrng 1 mev 1 QSARdata 1 estmeansd 1 trtf 1 BayesFM 1 pgirmess 1 RPESE 1 vars 1 patrick 1 afex 1 survPen 1 crop 1 listviewer 1 EnrichedHeatmap 1 gamlss.data 1 plotlyGeoAssets 1 nestedmodels 1 logger 4 diffviewer 1 ppcor 1 penalized 1 lsmeans 1 tram 1 fasterize 1 decontam 1 liftOver 1 structToolbox 1 multicool 5 spacrt 1 hsm 0 blockmodeling 1 SimDesign 1 rMisbeta 1 futile.options 1 catboost 1 fingerprint 1 SNPlocs.Hsapiens.dbSNP15.GRCh37 1 SNPlocs.Hsapiens.dbSNP1.GRCh37 1 CLIFF 1 ROI.plugin.lpsolve 1 complexheatmap 0 escape 1 glmmML 1 highs 1 candisc 1 spd 1 MLEcens 1 qgam 1 encode 1 SparseGrid 1 coneproj 1 contentid 1 pmplots 1 transport 1 sgeostat 1 mlt 1 rpf 1 conf.design 1 AlgDesign 1 fauxpas 1 elliptic 1 proffer 1 ttdo 0 sccs 1 mFilter 1 phylogram 1 BIAutils 1 snowfall 1 enhancedvolcano 0 ReactomePA 1 limmia 1 mstate 1 simsurv 1 Rdimtools 1 labdsv 1 R2OpenBUGS 1 Rdsdp 1 MatchThem 1 qrnn 1 sas7bdat 1 campsis 1 BioVersion 0 gongs 1 gsl 3 multinma 1 poorman 2 dynpred 1 muhaz 1 riskmetric 1 rpact 1 RUnit 6 pcalg 1 Publish 1 permimp 1 swagger 1 PMA 1 Amelia 1 gfonts 1 tensorA 7 maotai 1 mclustcomp 1 DiceDesign 7 tgp 1 toastui 1 vip 1 SPARQL 1 tmvnsim 1 Iso 1 munsell 19 nphRCT 1 rlemon 1 ggsurvfit 1 PolynomF 1 gMCP 1 grf 1 consort 1 CVXR 1 mmrm 38 truncdist 1 mvna 1 NbClust 1 bridgesampling 1 reactR 12 ggalluvial 1 gsbDesign 1 getopt 22 argusDS.data.preparation 2 argusDS.TradingSignals 1 argusDS.apc.utils 2 airr 1 rhino 7 anndata 1 ggtreeDendro 1 countrycode 11 janeaustenr 3 argus.DS.Credentials 2 argusDS.gamlss.modelling 2 tmap 1 harmony 8 SomaScan.db 13 timetk 2 rsnps 1 RnBeads.hg19 4 oompaData 3 TailRank 3 BioMartGOGeneSets 17 AlphaMissense.v2023.hg19 7 ashr 2 RCy3 1 cadd.v1.6.hg38 8 Rmisc 1 RxODE 1 keggsvg 1 sparseMatrixStats 1 ggvenn 1 rbioapi 3 jtools 1 wdman 1 CAM 1 D2C 1 SingleR 1 sfheaders 15 basilisk.utils 1 seqmagick 3 lmodel2 1 ggbreak 1 erify 1 rentrez 2 see 1 stdReg 1 archive 1 disk.frame 1 mpn.scorecard 1 officedown 1 ChemmineR 1 winboxr 1 mlr3proba 1 limSolve 1 scRNASeq.spatial 0 vhydeg 0 mia 1 maboost 1 RegParallel 1 RMTstat 1 BayesFactor 2 TTR 5 bambu 1 RIPSeeker 1 FedData 1 LowRankQP 1 amap 1 clusterSim 1 acepack 2 geojsonio 1 jnjtemplates 1 GSVAdata 1 simplifyEnrichment 1 SpatialExperiment 1 CNEr 1 rgexf 1 slingshot 1 densvis 1 appgen 1 ChemmineOB 1 biobank 1 maxLik 1 plogr 1 vendormetadatahelpers 1 ngsReports 1 tidyterra 1 rdflib 1 DEXSeq 1 ArchR 1 worrms 1 wikitaxa 1 cosmosR 1 sampling 1 DRDID 1 crossdes 1 fwb 1 VBsparsePCA 1 distro 1 Rchoice 1 golubEsets 1 alluvial 1 semTools 1 rapidoc 1 twangContinuous 1 geojsonsf 1 sylly 1 rtdists 1 mlmRev 1 imputeTS 1 mvabund 1 smacof 1 extraChIPs 1 MetaboAnalystR 1 HSAUR3 1 cgam 1 pkgKitten 1 concaveman 1 logspline 1 wdm 1 validate 1 kangar00 1 subplex 1 brmsmargins 1 Kendall 1 compute.es 1 alabama 1 aws.ec2metadata 1 RPtests 1 vembedr 1 coop 1 mbend 1 MSwM 1 Rsymphony 1 lokern 1 roll 1 spam64 1 mlfa 1 teal 1 exactextractr 1 rdocx 1 striprtf 1 adegraphics 1 adephylo 1 fakepackage 1 lastdose 1 EpiStats 1 BSgenome.Omela.CUSTOM.oenMel1.1 1 gRain 1 CMplot 1 twosamples 1 memuse 1 opdisDownsampling 1 measures 1 interval 1 ncvreg 1 phyr 1 LaplacesDemon 1 rosettR 1 libgeos 1 WikipediR 2 hypergeo 1 survPresmooth 1 mitml 1 phylobase 1 dastools 1 ConsRank 1 skimr 1 NEONiso 1 DoubletFinder 1 gwasrapidd 1 highlight 0 multiGSEA 1 FragPipeAnalystR 1 DatabaseConnector 1 groupdata2 1 nat.utils 1 RVAideMemoire 1 chimeraviz 1 wheatmap 1 lmom 14 influenceR 4 ggsci 58 osmdata 31 compositions 3 sunburstR 1 spatstat.explore 24 nortest 1 extrafontdb 1 flashClust 1 symengine 1 rhandsontable 2 protr 9 cyclocomp 18 SKAT 10 pec 1 adabag 1 arrayhelpers 1 meta 1 maptree 1 Microsoft365R 1 baguette 1 diptest 2 nonmem2rx 1 tolerance 1 workflowr 1 exactci 1 attempt 1 AzureAuth 1 clv 1 urltools 1 naniar 1 PopED 1 miniUI 1 dygraphs 1 rintrojs 7 argusDS.gamlss.utils 2 bizdays 2 RFOC 7 base64 3 argusDS.model.tools 2 rugarch 2 GenSA 2 BSgenome.Mmusculus.UCSC.hg38 1 sjlabelled 1 symphony 2 ShinyItemAnalysis 27 pbdZMQ 2 RevGadgets 1 botor 1 Deriv 1 dynfeature 1 dynwrap 1 babelwhale 1 snakecase 20 ggnetwork 1 DataOmnio 1 themis 1 crossmatch 1 radiator 1 crew.cluster 1 safetyData 1 bmp 1 simex 1 RgoogleMaps 7 janitor 4 smfishHmrf 1 infotheo 2 scRNAseq 1 margins 1 fmtr 1 gap.datasets 1 ggplot 1 MsCoreUtils 1 tximportData 1 signal 1 REddyProc 1 gWidgetstcltk 1 coxphf 1 HardyWeinberg 1 glca 1 cdip.datastore 1 repr 2 BGLR 1 sommer 1 genomeinfodbdata 2 LDlinkR 1 geojson 1 ktplots 1 muscData 1 Nebulosa 1 splatter 1 Giotto 1 Scillus 1 seqLogo 1 cba 1 compareGroups 1 mlr3pipelines 1 jaspar2020 0 siscreener 1 inlinedocs 1 khroma 1 qrcode 1 rworldmap 1 tximeta 0 mimosa 1 DataEditR 1 nonmem2R 1 IncDTW 1 wordcloud2 1 gsignal 1 lwgeom 2 SIS 1 hal9001 1 CytoML 1 LogicReg 1 NHANES 1 js 1 R2wd 1 bife 1 pzfx 1 fasttime 1 designmatch 1 pvclust 1 fortunes 1 sybilSBML 1 did 1 knitrdata 1 SGP 1 rbenchmark 1 BayesX 1 rr2 1 Greg 1 faraway 1 tmle 1 orientlib 1 clustMixType 1 grpreg 1 rmatio 1 flexsurvcure 1 devEMF 1 decor 1 printr 1 apexcharter 1 webp 1 lcopula 1 measurements 1 Ruchardet 1 msdata 1 akima 1 emdist 1 PEMM 1 distances 1 palr 1 fabletools 1 smooth 1 Swiffer 1 wrapr 1 deepregression 1 SIAMCAT 1 methylclockData 1 mlflow 1 BrowserViz 1 Maaslin2 1 m03modeldevelopment 1 heplots 1 ewfutils 1 startup 5 iGasso 1 WGScan 1 qualpalr 1 extraoperators 1 satellite 1 dreamerr 1 svDialogs 1 Icens 1 shapefiles 1 alkahest.generic 1 conditionz 1 proto 1 RVenn 0 networkDynamic 1 cogeqc 1 WebGestaltR 1 SomaVarDB 1 showimage 1 polycor 1 radarchart 1 ipcwswitch 1 jagsUI 1 KMsurv 1 whereami 0 gge 1 Dose 1 spectacles 1 txdb.dmelanogaster.ucsc.dm6.ensgene 0 iatlas.app 1 ClinicalQc 1 coda.base 1 arules 15 gprofiler2 2 DiagrammeR 5 RcppThread 3 setRNG 1 praise 1 RPMG 7 PEIP 1 sodium 12 pmxTools 1 geigen 1 bvls 1 chk 3 directlabels 1 DoseFinding 1 gridExtra 1 webchem 1 BB 1 pbivnorm 1 xpose.nlmixr2 1 lbfgsb3c 1 JavaGD 1 GPfit 1 CommonJavaJars 1 cranlogs 1 ECOSolveR 1 ggpattern 1 gscounts 1 gmailr 1 argusDS.spread.trading.utils 2 TxDb.Mmusculus.UCSC.mm39.knownGene 79 imputeLCMD 1 numbat 7 argusDS.trading.performance 2 TxDb.Cfamiliaris.UCSC.canFam6.refGene 10 geohashTools 1 FD 1 JASPAR2024 58 assertive.types 11 audio 1 aws 1 mirt 18 webshot2 2 remaCor 5 argusDS.shiny.utils 2 argusDS.backtesting.engine 2 flowAI 1 rAccess 1 RnBeads.rn5 3 TCGAbiolinksGUI.data 1 gupio 1 glmGamPoi 1 beadarray 1 alphashape3d 1 backbone 1 phytools 5 ggimage 1 RcppSimdJson 1 hexSticker 1 splus2R 2 dagitty 1 EValue 1 FlowSOM 1 treemap 2 brickster 1 callthat 1 quantable 1 entropy 2 explore 1 marginaleffects 1 IDPmisc 3 msa 1 celda 1 mlr3tuning 1 mlr3tuningspaces 1 condiments 1 scLinear 1 Rvcg 1 capsidr 1 neonUtilities 1 ScDblFinder 1 vdbR 1 drat 1 MetaboReport 1 ABAData 1 diffloop 1 HaploSim 1 PReMiuM 1 visR 1 goshawk 1 bioconductor 1 DirichletMultinomial 1 ontoProc 1 tidyseurat 1 monocle 1 bcellViper 0 sendmailR 2 RcppDate 1 pbmcref.SeuratData 1 NNLM 1 BSgenome.Mmul10.SIVmac251 1 future.batchtools 1 batchtools 1 nephro 1 waffle 1 Gmisc 1 BiocCheck 1 shinyMethyl 1 multinichenetr 0 M3Drop 1 plotROC 1 ArrayExpress 1 english 1 HTqPCR 1 fGarch 4 IAPWS95 1 gridSVG 1 argusDS.PossibilityCurves.db.utils 1 TCGAbiolinks 1 ICS 1 hexView 1 phylolm 1 mediation 1 tidySEM 1 whitening 1 modeltests 1 purrrlyr 1 kriging 1 oskeyring 1 DiagrammeRsvg 1 NetSwan 1 lfe 1 GLMMadaptive 1 AmesHousing 1 doRedis 1 lqmm 1 gridBase 1 packer 1 hrbrthemes 1 DCchoice 1 sampleSelection 1 ivprobit 1 titanic 1 tidyrules 1 AzureStor 1 alphahull 1 rcorpora 1 shinyEffects 1 gestate 1 bartMachine 1 rsm 1 mondate 1 smcfcs 1 r2d2 1 OpenMx 1 robustlmm 1 stopwords 1 babynames 1 fungible 1 PROreg 1 Ryacas 1 RcppRoll 1 Ecdat 1 lars 1 psychotree 1 BalancedSampling 1 fastshap 1 kmed 1 RNOmni 1 ThresholdROC 1 fenr 1 ggstats 2 qwraps2 1 preAnomalyDetectionCredLife 1 rMVP 1 Hoover 1 Biogenerics 1 sets 1 SCP 1 moleculaR 1 snplocs.hsapiens.dbsnp141.grch38 0 nipals 1 princurve 1 LoomExperiment 1 argusDS.modeldb 1 scviewer 1 SNPlocs.Hsapiens.dbSNP.GRCh37 1 GenomicTools 1 leafpop 1 unmarked 1 gbutils 1 combinat 1 relimp 1 metaplot 1 RPEIF 1 RPEGLMEN 1 variables 1 anticlust 1 gittargets 1 Polychrome 1 softImpute 1 MplusAutomation 1 vipor 12 contfrac 1 trackViewer 1 simpar 1 proj 0 grImport 1 BIGL 1 argusDS.FZ.utils 1 lightgbm 1 maicChecks 1 kml3d 1 tern 1 teal.modules.clinical 1 ylab.utils 1 shiny.react 1 btergm 1 ijtiff 1 orca 1 proxyC 2 HAC 1 eulerr 1 COSG 1 colortools 1 highcharter 1 MatrixEQTL 1 nat.util 1 PAIRADISE 1 NormalizerDE 1 this.path 1 Nozzle.R1 1 pspline 1 ff 33 colourvalues 1 ggmap 33 miscTools 1 flowClust 1 ggrastr 10 EnvStats 2 extrafont 3 xopen 1 HPO.db 1355 rgenoud 1 paws.end.user.computing 11 Rvmmin 1 pharmaRTF 1 ADGofTest 1 ssanv 1 fontLiberation 1 fmsb 1 stabledist 1 glassoFast 1 manipulateWidget 1 RcppDist 1 missForest 1 naturalsort 1 warp 11 drc 1 xgxr 1 table1 1 tableone 1 thematic 5 vdiffr 2 tidySummarizedExperiment 1 bnlearn 1 onbrand 1 nlmixr2rpt 1 pacman 1 mlegp 1 norm 3 visdat 1 broom.mixed 1 xlsx 1 gto 1 gamboostLSS 2 quantmod 11 argusDS.DB.manager.utilities 2 ggtreeExtra 1 tmvtnorm 2 attachment 4 GEOmap 7 feature 6 QDNAseq.hg19 1 dasnormalize.iomel 1 doSNOW 1 nanonext 2 tsfeatures 3 argusDS.PossibilityCurves.utils 1 argusDS.gamlss.forecast 2 Rserve 8 sjmisc 1 tidycensus 25 showtext 2 SHELF 1 cadd.v1.6.hg19 6 runonce 0 dynplot 1 bold 1 blastula 1 DEP 1 effectsize 2 mlpack 1 survey 2 ReactomeGSA 1 sparsebn 1 celldex 1 mirai 3 crew 3 PFIM 1 tiff 3 fastverse 1 psychometric 6 rzmq 2 globals, 1 modelbased 1 prediction 1 showtextdb 1 alembic 1 tergm 1 argusDS.Studio.FC 1 mlr3learners 1 mlr3verse 1 processCore 0 BSgenome.Mmulatta.NCBI.mmul10.tmp 1 RobinCar 1 MSstatsTMT 1 MESS 1 qqplotr 1 engitix.singlecell.db 1 sda 1 EpiNow2 1 scCustomize 2 shinyfeedback 0 ald 1 RJDBC 1 spsComps 1 scda 1 myphd 1 powerTCR 1 chromVAR 1 SoupX 1 tximportDat 1 mlr3filters 1 g3viz 1 ResidualMatrix 1 spatstat.model 2 rgbif 1 blockForest 1 AICcmodavg 1 MACSr 1 ava2 1 intamap 1 DEsingle 1 Rfit 1 CiteFuse 0 scClassify 0 scHOT 0 microseq 1 TENxPBMCData 1 WikidataR 1 usmap 1 taxize 1 bioc::GenomeInfoDbData 0 dttr2 1 periscope 1 pd.ht.2.0 1 SASmixed 1 condMVNorm 1 pdp 1 KFAS 1 prettycode 1 multiwayvcov 1 unitizer 1 merTools 1 AUC 1 tidyclust 1 VineCopula 1 tis 1 ambient 1 testit 1 formattable 1 varImp 1 fontcm 1 tsModel 1 catdata 1 metaBLUE 1 marqLevAlg 1 nycflights13 1 KernelKnn 1 tweedie 1 finetune 1 SparseArray 1 aod 1 lfda 1 affxparser 0 geomorph 1 omicsbase 0 tikzDevice 1 BSGenome 1 SAIGEgds 1 BSgenome.Ggallus.ENSEMBL.galGal6 1 MSstatsLiP 1 argusDS.gamlss.distributions 1 mpm 1 plyranges 1 Rlab 1 scalreg 1 wordcloud 1 expint 1 cobs 1 pyinit 1 ISOcodes 1 robumeta 1 orthopolynom 1 matrixTests 1 bindr 1 redux 1 WikidataQueryServiceR 1 FactoInvestigate 1 JGR 1 katex 1 smotefamily 1 mratios 1 annotatr 1 BSgenome.Hsapiens.1000genomes.hs3d5 1 bigdist 1 fastreeR 1 capushe 1 swirl 1 PowerTOST 1 itertools 1 teal.modules.general 1 pathfindR.data 1 pmartR 1 exomePeak2 0 flair 1 QDNAseq.mm10 1 canvasXpress 1 ggfittext 2 rredlist 1 embed 1 vpc 1 profvis 37 reReg 1 rminer 1 paws.developer.tools 11 gdtools 41 abind 1 fontBitstreamVera 1 fpc 2 gamm4 1 rjags 2 shapes 1 mcmc 1 clisymbols 1 clustermq 4 DiceKriging 1 BOIN 1 compareDF 1 rtf 1 overlapping 1 BSgenome.Hsapiens.UCSC.hs1 21 hash 2 bootstrap 1 anytime 5 gghalves 1 ggm 1 scrypt 4 spelling 2 argusDS.driver.importance 2 argusDS.gamlss.testing 3 alakazam 1 ncdfFlow 1 TCC 6 logr 1 stars 3 linprog 1 OmnipathR 1 orthogene 1 RestRserve 7 qqman 3 tidytext 3 RnBeads.mm9 3 texreg 2 argusDS.Studio.MyStudio 2 factoextra 3 bio3d 3 bigstatsr 1 Rmpi 1 ggformula 31 smldesign 1 tableHTML 1 ImpulseDE2 1 statsExpressions 2 connectwidgets 1 propr 1 easyENTIM 1 flower 1 BgeeDB 1 shinyLP 2 argusDS.tabulator 1 ggiraph 4 confintr 1 filesstrings 1 org.hsa.eg.db 1 HSMMSingleCell 1 shinyvalidate 54 densEstBayes 6 bricks 1 clValid 1 Rmagic 1 rBLAST 1 bbr.bayes 1 pharmaversesdtm 1 prompt 1 metabaser 1 metabolomics 1 argusDS.Studio.APC 1 Delaporte 1 reporting 1 poolfstat 1 googleCloudStorageR 1 googleAuthR 1 MSstatsTMTs 1 scDblFinder 1 crosstable 1 phonTools 1 fastcluster 5 shinyauth 1 dlookr 1 finalfit 1 ldap 1 R2HTML 1 txtq 1 encryptr 1 statTarget 1 pals 2 uatools 1 gRbase 1 BASiCS 1 ExperimentHub 1 SnapATAC 1 httpgd 1 ttservice 1 pvca 1 biostatR 1 amgsafetyvis 1 amlogger 1 MPV 1 rliger 1 MODIStsp 2 pammtools 1 pixmap 2 ritis 1 solrium 1 sme 1 googleVis 2 CRISPR.shinyapp 1 UCell 1 gestalt 7 zen4R 1 rice 1 checkr 1 stinepack 1 stevedore 1 pd.htax.hta.2.0 1 tinysnapshot 1 svGUI 1 ggokabeito 1 actuar 1 feather 1 glmx 1 lm.beta 1 semEff 1 missRanger 1 logcondens 1 ggplot2movies 1 coxme 1 multgee 1 whoami 1 logitnorm 1 GeneralizedHyperbolic 2 nimble 1 geos 1 Factoshiny 1 feisr 1 rprintf 1 ISLR 1 ascii 1 LDplots 1 optpart 1 icenReg 1 imbalance 1 benchr 1 WRS2 1 optweight 1 metaplus 1 parallelMap 1 pdfCluster 1 qcc 1 binGroup 1 gmnl 1 crch 1 hdi 1 missMDA 2 airway 1 MPA 1 datapasta 1 phylosignal 1 Momocs 1 RRPP 1 treespace 1 almanac 1 abc 1 dbx 7 PROJ 5 duct.tape 1 assertive.code 1 grImport2 1 relaimpo 1 tm 2 DiffBind 1 AGHmatrix 1 argusDS.possibility.curves.daily 1 argusDS.GlobalSettings 1 TrajectoryUtils 1 iq 1 pandoc 1 ROI 1 AssotesteR 1 cpm 1 enrichwith 1 sftime 1 Ecfun 1 cvar 1 scoringRules 1 psychotools 1 basefun 1 pinfsc50 1 pd.primeview 1 bain 1 slackr 0 shapr 1 NanoStringNCTools 0 BSgenome.Hsapiens.1000genomes.hs38d5 1 openxlsx2 1 syntenet 1 RSclient 1 promise 1 muscle 0 rlist 1 shinyloadtest 1 ADMM 1 invgamma 1 ggsurvfir 0 igvShiny 1 cvms 1 REBayes 1 AMARETTO 0 multcompView 38 leaflet 4 d3r 1 gggenes 1 phangorn 3 sourcetools 60 rnaturalearth 2 rncl 1 MPO.db 1194 dfoptim 1 ROracle 1 rtables 2 sirnakit 1 svUnit 1 prabclus 2 torch 1 maxstat 1 metR 1 websocket 1 BART 1 diffdf 1 cellranger 1 tidylog 1 wesanderson 1 ncar 1 netmeta 1 neuralnet 1 assert 1 copula 2 scs 1 mockery 4 UpSetR 1 data.tree 12 phosphoricons 5 dbarts 1 xpose4 1 gemtc 1 ggfortify 2 ggmosaic 1 robfilter 2 argusDS.Studio.utils 2 bestNormalize 2 DistributionUtils 2 billboarder 8 shinytest2 3 DDCompanion 1 scistreer 7 RcppML 6 gginnards 1 ggprism 1 shinymanager 2 maketools 13 NCmisc 2 argusDS.data 2 tokenizers 3 oompaBase 3 RnBeads.mm10 4 engitomixmk2 0 ecodist 1 RNAi 1 qgraph 2 argusDS.utilities 1 gapminder 1 shinyMatrix 1 AzureRMR 4 gridGraphics 2 Azimuth 1 ggpmisc 4 vscDebugger 1 S4Arrays 2 pbkrest 0 spatstat 2 shinyAce 2 mgm 1 CmsAnalytics 1 ccdrAlgorithm 1 geometries 15 bsicons 2 plot3D 2 readbitmap 1 IPDfromKM 1 cvAUC 1 emulator 1 tidyTree 1 drgee 1 vistime 31 sigclust 1 flux 1 spatstat.linnet 2 report 1 shinyglide 1 easystats 1 TreeSummarizedExperiment 1 EnhancedVolcano 1 coveffectsplot 1 common 1 pmparams 1 review 1 runjags 1 PK 1 statnet 1 shinyFeedback 1 gubraqsar 1 Morpho 1 tidyxl 1 mapplots 1 bbotk 1 MsFeatures 0 SpidermiR 1 import 3 misc3d 1 panelr 1 iheatmapr 5 descr 1 ClinViz 1 IRdisplay 1 leaflet.minicharts 1 mppR 1 europepmc 1 ArvadosR 1 SuppDists 1 nor1mix 2 ProjecTILs 1 STdeconvolve 1 plotgardener 0 BatchJobs 1 HSAUR2 1 TFisher 1 riverplot 1 mapview 1 forestploter 1 ridigbio 1 extraInserts 1 rmsb 1 prioritylasso 1 jsonify 1 miloR 1 picante 1 multipanelfigure 2 scDC 0 laeken 2 VIM 1 geodata 1 ggnewscales 1 caper 1 dcdatr 1 pd.ha.2.0 1 pd.hxta.2.0 1 pd.htax.2.0 1 granny 1 BMisc 1 ICSOutlier 1 tippy 1 equivalence 1 round 1 tufte 1 poLCA 1 sparkline 1 causaldata 1 BradleyTerry2 1 redoc 1 summarytools 1 pmml 1 flowStats 1 tkrplot 1 ivreg 1 fst 1 ggside 3 multimode 1 float 1 ebal 1 relations 1 itsadug 1 glpkAPI 1 ROC 1 lasso2 1 HiClimR 1 GWENA 1 MEMSS 1 joineRML 1 optimParallel 1 tidycmprsk 1 pcse 1 huge 1 sparsepca 1 ATR 1 RobStatTM 1 affyPLM 1 lvec 1 energy 1 tesseract 1 HDCytoData 1 oaqc 1 mockr 1 qreport 1 clubSandwich 1 PCICt 1 logitr 1 FME 1 manipulate 1 tcltk2 1 simputation 1 gifski 1 scda.2022 1 commentr 1 tokupika 1 Luminescence 1 readODS 1 sos 1 greybox 1 fastmatrix 1 fstcore 1 reporter 1 RnBeads 1 clariomshumancdf 0 futile.logger 1 logging 1 Sigfried 1 FlowCore 1 ropls 1 RGCCA 0 SkewHyperbolic 2 argusDS.model.testing 1 SeuratDisk 1 CATT 1 argusDS.data.engineering 1 RVtests 1 plotfunctions 1 benchmarkmeData 1 bigmemory.sri 1 som 1 bartMachineJARs 1 apex 1 madness 1 yspec 1 ratelimitr 1 PairedData 1 equate 1 randomNames 1 mvnfast 0 rjsoncons 1 dspNgs 0 Bsgenome.Mmusculus.UCSC.mm10 1 phylotools 1 twang 1 BIApylon 1 WES.1KG.WUGSC 1 maic 1 R2jags 1 rbmi 1 metadat 1 multicross 1 longitudinalData 1 sesameData 1 NMsim 1 fftwtools 1 downloadthis 1 do.db 0 PBIR 0 descsuppR 1 InkblotAnalytics 20 cplm 2 qdapTools 1 tfautograph 1 rotl 1 rmeta 1 optimr 1 Rmpfr 12 rootSolve 14 pch 1 pkgsearch 1 webutils 1 formula.tools 1 matlib 1 nnls 4 butcher 2 urlchecker 1 tidybayes 1 tree 1 bayesmeta 1 blavaan 1 ncappc 1 numbers 1 vcd 3 exact2x2 1 AzureGraph 4 EMD 1 httpcode 1 mitools 1 MLmetrics 1 mlogit 1 shinyTree 3 broman 1 debugme 1 ini 1 Rglpk 2 productplots 1 gridpattern 1 echarts4r 10 moments 2 argusDS.data.preparation2 3 lamW 3 flowWorkspace 0 box 8 fBasics 2 shinyscreenshot 4 leafem 1 leaflet.providers 2 sna 2 recosystem 12 rslurm 1 RnBeads.hg38 4 ca 4 shinydisconnect 1 gson 6 rgdal 18 ChIPseeker 1 roptim 0 bigutils 0 bigsparser 0 nabor 1 ggstance 1 ggpp 6 ScaledMatrix 1 PoissonBinomial 1 SID 1 strex 2 sloop 1 MetaUtility 1 kit 1 bmcite.SeuratData 1 PCAtools 1 org.Hsa.eg.db 1 argusDS.FZ.SourceData 1 QuickJSR 1 nmrec 1 clusterGeneration 3 rrapply 1 imager 2 openCyto 1 valr 1 starter 1 geodiv 1 scGate 1 landscapemetrics 1 dbaccess 1 RProtoBufLib 1 Herper 1 mlmm.gwas 1 pedigree 1 SOMbrero 1 scatterD3 1 RcppClassic 1 jqr 9 presto 1 scRepertoire 1 BiocStyle 1 cicero 1 plotmm 1 betareg 1 jcolors 1 basilisk 1 mlr3cluster 1 mlr3data 1 circlesize 0 berryFunctions 1 useful 1 GGally 16 VGAMextra 1 RSelenium 1 liana 0 bindrcpp 1 biomartr 1 animation 2 natserv 1 bluster 0 hopach 0 WriteXLS 2 rtweet 7 qdapRegex 1 brglm2 1 pegboard 1 tinkr 1 spgs 1 rAmCharts 1 ada 1 usmapdata 1 gbRd 1 nFactors 1 FMStable 1 metaBMA 1 Bessel 1 gstat 1 PBSmapping 1 miceadds 1 teal.widgets 1 scagnostics 1 dynlm 1 wakefield 1 spacefillr 1 Deducer 1 rlecuyer 1 tripack 1 simplermarkdown 1 estimatr 1 mhurdle 1 kSamples 1 sybilGUROBI 1 udunits2 1 equatags 1 SimComp 1 ClassDiscovery 1 rdd 1 triangle 1 dotwhisker 1 casebase 1 beepr 1 DoE.base 1 PASWR 1 NlcOptim 1 igraphdata 1 alr4 1 netrankr 1 censReg 1 pimeta 1 carrier 1 nestedLogit 1 NISTunits 1 BioGenerics 1 BWStest 1 clinfun 1 r2rtf 1 FrF2 1 TimeProjection 1 libr 1 idmap3 1 BSgenomes 1 Ziploc 1 beanplot 1 Txdb.Hsapiens.UCSC.hg38.knownGene 1 CeTF 1 SNPlocs.Hsapiens.dbSNP14.GRCh37 1 anRichment 1 DoEstRare 1 sesame 1 sqldf 1 RLRsim 1 LearnBayes 1 tensor 1 origami 1 spec 1 etm 1 profmem 1 zinbwave 1 heemod 1 mrggsave 1 gitlabr 1 miaViz 1 gsubfn 1 xslt 1 toOrdinal 1 settings 1 argusDS.DataValidation 1 ggeasy 1 filehash 0 httput 1 phylocanvas 1 tanggle 1 ICSNP 1 TNO 1 sen2r 1 knockoff 1 R2WinBUGS 1 nbpMatching 1 JMbayes 1 kknn 1 kml 1 IncidencePrevalence 1 tidytlg 1 syuzhet 1 rgnparser 1 TSCAN 1 msigdb 1 DAISIE 1 r 1 prettymapr 1 cyphr 1 assertive 1 qbaDatabase 1 IlluminaHumanMethylationEPICv2anno.20a1.hg38 9 ggtern 6 degreenet 1 egor 1 snpStats 1 MonoPhy 1 argusDS.data.visualisation 1 AdaptGauss 1 omnibus 1 calibrate 1 TLMoments 1 wrMisc 1 hdnom 1 confoundr 1 APCtools 1 PBSddesolve 1 devutils 1 rrsq 1 coxphw 1 biostat3 1 daff 1 scITD 1 elevatr 2 treemapify 1 mlr3spatiotempcv 1 LinMod2 1 GSA 1 maftools 1 proteomixr 1 org.Ecumenical.db 1 gtExtras 0 dataMaid 1 rearrr 1 tern.gee 1 mctq 1 hugene11stv1cdf 0 sassy 0 R2admb 1 pedtools 1 angrycell 1 sdpR 0 protoarrayr 0 ggraph2 1 CoRegNet 1 GraphGallery 1 EpiDISH 0 TOAST 1 radiant.data 1 DataVisualizations 1 EPICv2manifest 4 assertive.strings 1 ggwordcloud 1 base2grob 1 DALEX2 1 rbokeh 1 AnnotationHubData 1 argusDS.distributions 1 CAbiNet 1 redland 1 bcp 1 nestcolor 1 CoxPhLb 1 errorlocate 1 easyalluvial 1 haplo.stats 1 iotools 1 RPresto 1 vitae 1 binman 1 gralarkivar 1 boomer 1 gameofthrones 1 PKreport 1 secretbase 1 iBreakDown 1 astsa 1 seqArray 1 survex 1 reghelper 1 awsMethods 1 cellxgene.census 1 ontologyPlot 1 CMAverse 0 ace.fma 1 ggchicklet 0 RcppAlgos 1 ips 1 name 1 ggiraphExtra 1 pathfindR 1 configr 1 StatCharrms 1 dpplyr 0 enrichPlot 1 deconstructSigs 1 wateRmelon 0 UniprotR 1 rrcovNA 0 sasLM 0 BSgenome.Oaries.ENSEMBL.RambV2 0 bRacatus 0 wkb 1 piggyback 1 hoardr 0 ChIPpeakAnno 0 dcat 0 argusDS.gamlss.smoothers 1 preproc.iquizoo 1 cn.mops 0 notame 0 HGNChelper 0 InraeThemes 1 zenith 1 fastseg 0 BSgenome.Mmusculus.UCSC.mm1z 1 chanmetab 1 argusDS.signal.dataprep 1 assertive.datetimes 1 GastrographPackage 1 pspearman 1 glmperm 1 Lmoments 1 censored 1 modeltime.ensemble 1 leaflegend 1 kinship2 1 patch 1 Boom 1 relsurv 1 fable 1 adjustedCurves 1 mlr3viz 1 spocc 1 argusDS.database 1 topicmodels 1 planet 1 santoku 1 tidypredict 1 audited 1 ghpm 1 hydroPSO 1 logrrr 1 sceptre 1 jskm 1 gdsx 1 radiant.model 1 dataCompareR 1 unrtf 1 BE 1 themeSanofi 1 digitalDLSorteR 1 BioEnricher 1 monocle3 1 BPSC 1 scImpute 1 NetBID2 0 consensusClustR 1 dynsbm 1 teal.reporter 1 rlistings 1 ggdensity 1 geobr 1 olsrr 1 rnaturalearthdata 1 FSA 1 coastr 1 Shinyusagelogr 1 MOFA 0 renderthis 1 qclMatrix 1 ExperimentHubData 1 ecfc 1 faux 1 datasauRus 1 rosm 1 distory 1 rgr 0 rayimage 1 ITKR 0 Unicode 0 SpatialDecon 0 MCMCprecision 1 d3treeR 1 gtrellis 0 Repitools 0 zelusutils 1 radiant 1 fExtremes 4 caretEnsemble 1 swamp 1 ingredients 1 DiurnalMRI 1 installr 1 ipw 1 survMS 1 InformationValue 1 MKmisc 1 argusDS.smoothers 1 openeo 1 DataExplorer 1 interactomes 1 argusDS.trading.optimization 1 tibbke 1 iNEXT 1 prompter 1 ELMER.data 1 oricvis 1 geojsonlint 1 SpatialEpi 1 latentnet 1 lpridge 1 pedigreemm 1 refund 1 greekLetters 1 MatrixExtra 1 methylclock 1 satchel 1 nestedcv 1 aditools 1 bsts 1 BSgenome.Mmusculus.UCSC.mm19 1 dataframes2xls 1 safeBinaryRegression 1 GAMBLR.results 1 outliers 1 forestmodel 1 shinyauthr 1 dwrPlus 1 prada 1 NormalyzerDE 1 ggedit 1 Rspectra 1 msatR 1 tsibbledata 1 L1pack 1 dotplot 1 SAVER 1 purrrr 1 biotools 1 cronR 1 monkey 1 PowerExplorer 1 lbaQcCheck 1 cellpypes 0 missMethyl 0 redison 1 pipebind 0 polars 0 SAGx 1 sdtmchecks 1 RDCOMClient 1 geeasy 0 mousecortexref.SeuratData 1 DALEX 1 SeuratWrapper 1 rayvertex 1 RcppInt64 0 assertive.base 0 assertive.files 0 ggrap2 1 snplocs.hsapiens.dbsnp155.grch37 1 HilbertCurve 0 YAPSA 0 minet 0 viper 0 tidyproteomics 0 demuxmix 0 SeruatObject 0 org.KEGG.db 0 taxonomizr 1 basemaps 1 BiplotML 1 ergm.multi 1 genetics 1 haplotrackR 1 GAMBoost 1 tornado 1 simr 1 ResourceSelection 1 NACHO 1 argusDS.S3 1 graphiQs 1 rasterVis 1 hypred 1 teal.code 1 lazy 1 ruODK 1 misty 1 shinipsum 1 SomaDataIO 1 nls2 1 ath1121501frmavecs 1 synapser 1 protti 1 Synth 1 mosaic 1 DMwR 1 fftw 1 kyotil 1 fastqcr 1 arvupload 1 usdm 1 markovchain 1 metrumrg 1 PKPDdatasets 1 SASxport 1 date 1 argusDS.UI 1 GSEAbase 1 iptmnetr 1 MendelianRandomization 1 Dino 1 dlm 1 teal.builder.modules 1 httptest2 1 preprocessorCore 1 bettermc 0 rbioinfcookbook 1 sleuth 1 bsseq 0 rspm 1 magicaxis 1 RProtoBuf 1 signac 1 PRISMselector 1 copynumber 1 fido 1 pkbrtest 1 SNPlocs.Hsapiens.dbSNP158.GRCh37 1 poibin 0 OUTRIDER 0 synbreed 1 traits 0 rsparkling 1 snpar 1 argusDS.model.validation 1 googlesheets 0 riem 0 rnoaa 0 QDNAseq 0 gscreend 0 RSVSim 0 methylKit 0 HMMcopy 0 mlmm 0 rcpp 1 dnet 1 assertive.data.us 1 co.db 1 noctua 1 SplicingVizUtils 1 LBE 1 fairhub.r.client 1 BioBase 1 DNABarcodes 1 oncomarkerbase 1 cols4all 1 roxygen 1 hypergate 1 vimp 1 mma 1 S4vectors 1 freetypeharfbuzz 1 pkgpub 1 ROI.plugin.glpk 1 rstanemax 1 XLConnectJars 1 SimInf 1 nanoarrow 1 tsoutliers 1 rmapshaper 1 ggmsa 1 sctrnasform 1 snplocs.hsapiens.dbsnp144.grch37 1 teal.modules.sanofi 1 slopeR 1 funkyheatmap 1 deeptime 1 teal.slice 1 zingeR 1 microeco 0 SmartEDA 1 BridgeDbR 1 tern.mmrm 1 TauStar 1 teal.logger 1 CytoTree 1 protViz 1 snapcount 0 rlaR 1 battenberg 1 shiny.semantic 1 patientProfilesVis 1 Rcmdr 1 ggspatial 1 nanopipeline 0 biomod2 0 beaver 0 bestglm 1 qicharts 1 NanoStringNorm 0 oce 0 HilbertVis 0 gemini 0 CGHcall 0 dblplyr 1 ore 1 assertive.data 1 assertive.data.uk 1 tabulizerjars 1 gamlss.add 1 NORMT3 1 MafH5.gnomAD.v4.0.GRCh38 3 contingencytables 1 smoother 1 immunarch 1 kutils 1 Rlabkey 1 mixture 1 VariantWarehouseBMS 1 bkbutils 1 BayesPostEst 1 broomExtra 1 ggalt 1 presser 1 tidyHeatmap 1 RISCA 1 utilsStuff 1 pkglite 1 mhsmm 1 reader 1 teal.data 1 mycor 1 hdf5 0 pbv 1 aricode 1 RNAmodR.Data 1 tester 0 l2p 1 iatlasGraphQLClient 1 powsimR 1 4.10.1 1 regress 1 ACTIONet 0 argusDS.gamboostLSS 1 assertive.numbers 0 ptw 1 RTN 0 fANCOVA 0 HiTC 0 deconfectHelpers 0 gmthemes 1 RedeR 0 modetest 1 cydar 0 WorldFlora 1 Rfast2 1 assertive.reflection 1 tabulizer 1 GeoTcgaData 1 maditr 1 OlinkAnalyze 1 PupillometryR 1 rvertnet 1 rmspc 1 R2GUESS 1 ELMER 1 IlluminaHumanMethylationEPICv2manifest 3 ComplexUpset 1 SCtools 1 BoomSpikeSlab 1 JBrowseR 1 altair 1 choroplethr 1 mosaicData 1 schoolmath 1 MBESS 1 ufs 1 spatsurv 1 nlmeODE 1 paquet 1 heatmap.plus 1 neo2R 1 stdmchecks 1 refinr 1 parcats 1 envalysis 1 tuneRanger 1 piton 1 taskscheduleR 1 eq5d 1 excelR 1 d3heatmap 1 ProgMan 1 od 1 tsibble 1 Biostring 1 SeuratData 1 DECENT 1 tidydr 1 metapod 1 SPOTlight 1 text2vec 1 XIFF 1 rsatscan 1 APL 1 conumee 0 gausscov 1 spdata 0 QuantPsyc 0 dismo 0 readJDX 1 doseR 1 microbiome 0 monaLisa 1 rayrender 1 ROSE 1 pulsar 1 godmode 1 job 0 SomaticSignatures 0 InteractionSet 0 progeny 0 homo.sapiens 1