HiCDataLymphoblast
This is the development version of HiCDataLymphoblast; for the stable release version, see HiCDataLymphoblast.
Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009
Bioconductor version: Development (3.21)
The HiC data from human lymphoblastoid cell line (HindIII restriction) was retrieved from the sequence read archive and two ends of the paired reads were aligned separately with bowtie.
Author: Borbala Mifsud
Maintainer: Borbala Mifsud <b.mifsud at qmul.ac.uk>
citation("HiCDataLymphoblast")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("HiCDataLymphoblast")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HiCDataLymphoblast")| package_vignettes.pdf | R Script | |
| Reference Manual |
Details
| biocViews | ExperimentData, Homo_sapiens_Data |
| Version | 1.41.0 |
| License | GPL-3 |
| Depends | |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | ShortRead |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | GOTHiC |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | HiCDataLymphoblast_1.41.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/HiCDataLymphoblast |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/HiCDataLymphoblast |
| Package Short Url | https://bioconductor.org/packages/HiCDataLymphoblast/ |
| Package Downloads Report | Download Stats |