tracktables
This is the development version of tracktables; for the stable release version, see tracktables.
Build IGV tracks and HTML reports
Bioconductor version: Development (3.23)
Methods to create complex IGV genome browser sessions and dynamic IGV reports in HTML pages.
Author: Tom Carroll, Sanjay Khadayate, Anne Pajon, Ziwei Liang
Maintainer: Tom Carroll <tc.infomatics at gmail.com>
Citation (from within R, enter
citation("tracktables")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("tracktables")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | ReportWriting, Sequencing, Software |
| Version | 1.45.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (11 years) |
| License | GPL (>= 3) |
| Depends | R (>= 3.0.0) |
| Imports | IRanges, GenomicRanges, XVector, Rsamtools, XML, tractor.base, stringr, RColorBrewer, methods |
| System Requirements | |
| URL |
See More
| Suggests | knitr, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/tracktables |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/tracktables |
| Package Short Url | https://bioconductor.org/packages/tracktables/ |
| Package Downloads Report | Download Stats |