hypeR
This is the development version of hypeR; for the stable release version, see hypeR.
An R Package For Geneset Enrichment Workflows
Bioconductor version: Development (3.21)
An R Package for Geneset Enrichment Workflows.
Author: Anthony Federico [aut, cre], Andrew Chen [aut], Stefano Monti [aut]
Maintainer: Anthony Federico <anfed at bu.edu>
Citation (from within R, enter
citation("hypeR")
):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("hypeR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("hypeR")
hypeR | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | Annotation, GeneSetEnrichment, Pathways, Software |
Version | 2.5.0 |
In Bioconductor since | BioC 3.9 (R-3.6) (5.5 years) |
License | GPL-3 + file LICENSE |
Depends | R (>= 3.6.0) |
Imports | ggplot2, ggforce, R6, magrittr, dplyr, purrr, stats, stringr, scales, rlang, httr, openxlsx, htmltools, reshape2, reactable, msigdbr, kableExtra, rmarkdown, igraph, visNetwork, shiny, BiocStyle |
System Requirements | |
URL | https://github.com/montilab/hypeR |
Bug Reports | https://github.com/montilab/hypeR/issues |
See More
Suggests | tidyverse, devtools, testthat, knitr |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | hypeR_2.5.0.tar.gz |
Windows Binary (x86_64) | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/hypeR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/hypeR |
Bioc Package Browser | https://code.bioconductor.org/browse/hypeR/ |
Package Short Url | https://bioconductor.org/packages/hypeR/ |
Package Downloads Report | Download Stats |