miRNAmeConverter

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see miRNAmeConverter.

Convert miRNA Names to Different miRBase Versions


Bioconductor version: 3.7

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Citation (from within R, enter citation("miRNAmeConverter")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("miRNAmeConverter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews Preprocessing, Software, miRNA
Version 1.8.0
In Bioconductor since BioC 3.3 (R-3.3) (8 years)
License Artistic-2.0
Depends miRBaseVersions.db
Imports DBI, AnnotationDbi, reshape2
System Requirements
URL
See More
Suggests methods, testthat, knitr, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package miRNAmeConverter_1.8.0.tar.gz
Windows Binary miRNAmeConverter_1.8.0.zip
Mac OS X 10.11 (El Capitan) miRNAmeConverter_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRNAmeConverter
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/miRNAmeConverter
Package Short Url https://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive