UniProt.ws

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see UniProt.ws.

R Interface to UniProt Web Services


Bioconductor version: 3.7

A collection of functions for retrieving, processing and repackaging the UniProt web services.

Author: Marc Carlson [aut, cre], Csaba Ortutay [ctb]

Maintainer: Marc Carlson <maintainer at bioconductor.org>

Citation (from within R, enter citation("UniProt.ws")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("UniProt.ws")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("UniProt.ws")
UniProt.ws: A package for retrieving data from the UniProt web service PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Annotation, BioCarta, GO, Infrastructure, KEGG, Software
Version 2.20.4
In Bioconductor since BioC 2.12 (R-3.0) (11 years)
License Artistic License 2.0
Depends methods, utils, RSQLite, RCurl, BiocGenerics(>= 0.13.8)
Imports AnnotationDbi, BiocFileCache, rappdirs
System Requirements
URL
See More
Suggests RUnit
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me cleaver, dagLogo
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package UniProt.ws_2.20.4.tar.gz
Windows Binary UniProt.ws_2.20.4.zip
Mac OS X 10.11 (El Capitan) UniProt.ws_2.20.4.tgz
Source Repository git clone https://git.bioconductor.org/packages/UniProt.ws
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/UniProt.ws
Bioc Package Browser https://code.bioconductor.org/browse/UniProt.ws/
Package Short Url https://bioconductor.org/packages/UniProt.ws/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive