TargetSearch

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see TargetSearch.

A package for the analysis of GC-MS metabolite profiling data


Bioconductor version: 3.7

This packages provides a targeted pre-processing method for GC-MS data.

Author: Alvaro Cuadros-Inostroza <inostroza at mpimp-golm.mpg.de>, Jan Lisec <lisec at mpimp-golm.mpg.de>, Henning Redestig <henning.red at googlemail.com>, Matt Hannah <matthew.hannah at bayercropscience.com>

Maintainer: Alvaro Cuadros-Inostroza <inostroza at mpimp-golm.mpg.de>

Citation (from within R, enter citation("TargetSearch")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TargetSearch")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TargetSearch")
RI correction PDF R Script
The TargetSearch Package PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews DecisionTree, MassSpectrometry, Preprocessing, Software
Version 1.36.1
In Bioconductor since BioC 2.4 (R-2.9) (15 years)
License GPL (>= 2)
Depends ncdf4
Imports graphics, grDevices, methods, stats, tcltk, utils
System Requirements
URL https://github.com/acinostroza/TargetSearch
Bug Reports https://github.com/acinostroza/TargetSearch/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TargetSearch_1.36.1.tar.gz
Windows Binary TargetSearch_1.36.1.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) TargetSearch_1.36.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/TargetSearch
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TargetSearch
Package Short Url https://bioconductor.org/packages/TargetSearch/
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Old Source Packages for BioC 3.7 Source Archive