SLGI

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SLGI.

Synthetic Lethal Genetic Interaction


Bioconductor version: 3.7

A variety of data files and functions for the analysis of genetic interactions

Author: Nolwenn LeMeur, Zhen Jiang, Ting-Yuan Liu, Jess Mar and Robert Gentleman

Maintainer: Nolwenn Le Meur <nlemeur at gmail.com>

Citation (from within R, enter citation("SLGI")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SLGI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SLGI")
SLGI Vignette PDF R Script
Reference Manual PDF

Details

biocViews Genetics, GraphAndNetwork, Network, Proteomics, Software
Version 1.40.0
In Bioconductor since BioC 2.2 (R-2.7) (16 years)
License Artistic-2.0
Depends R (>= 2.10), ScISI, lattice
Imports AnnotationDbi, Biobase, GO.db, ScISI, graphics, lattice, methods, stats, BiocGenerics
System Requirements
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Suggests GO.db, org.Sc.sgd.db
Linking To
Enhances
Depends On Me PCpheno
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SLGI_1.40.0.tar.gz
Windows Binary SLGI_1.40.0.zip
Mac OS X 10.11 (El Capitan) SLGI_1.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SLGI
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SLGI
Package Short Url https://bioconductor.org/packages/SLGI/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive