Mfuzz

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see Mfuzz.

Soft clustering of time series gene expression data


Bioconductor version: 3.7

Package for noise-robust soft clustering of gene expression time-series data (including a graphical user interface)

Author: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Maintainer: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Citation (from within R, enter citation("Mfuzz")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Mfuzz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Mfuzz")
Introduction to Mfuzz PDF R Script
Reference Manual PDF

Details

biocViews Clustering, Microarray, Preprocessing, Software, TimeCourse, Visualization
Version 2.40.0
In Bioconductor since BioC 1.8 (R-2.3) (18 years)
License GPL-2
Depends R (>= 2.5.0), Biobase(>= 2.5.5), e1071
Imports tcltk, tkWidgets
System Requirements
URL http://mfuzz.sysbiolab.eu/
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Mfuzz_2.40.0.tar.gz
Windows Binary Mfuzz_2.40.0.zip
Mac OS X 10.11 (El Capitan) Mfuzz_2.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Mfuzz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Mfuzz
Package Short Url https://bioconductor.org/packages/Mfuzz/
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Old Source Packages for BioC 3.7 Source Archive