ENVISIONQuery

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ENVISIONQuery.

Retrieval from the ENVISION bioinformatics data portal into R


Bioconductor version: 3.7

Tools to retrieve data from ENVISION, the Database for Annotation, Visualization and Integrated Discovery portal

Author: Alex Lisovich, Roger Day

Maintainer: Alex Lisovich <all67 at pitt.edu>, Roger Day <day01 at pitt.edu>

Citation (from within R, enter citation("ENVISIONQuery")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ENVISIONQuery")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ENVISIONQuery")
An R Package for retrieving data from EnVision into R objects. PDF R Script
Reference Manual PDF

Details

biocViews Annotation, Software
Version 1.28.0
In Bioconductor since BioC 2.8 (R-2.13) (13 years)
License GPL-2
Depends rJava, XML, utils
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me IdMappingRetrieval
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ENVISIONQuery_1.28.0.tar.gz
Windows Binary ENVISIONQuery_1.28.0.zip
Mac OS X 10.11 (El Capitan) ENVISIONQuery_1.28.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ENVISIONQuery
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ENVISIONQuery
Package Short Url https://bioconductor.org/packages/ENVISIONQuery/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive