BrainStars

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see BrainStars.

query gene expression data and plots from BrainStars (B*)


Bioconductor version: 3.7

This package can search and get gene expression data and plots from BrainStars (B*). BrainStars is a quantitative expression database of the adult mouse brain. The database has genome-wide expression profile at 51 adult mouse CNS regions.

Author: Itoshi NIKAIDO <dritoshi at gmail.com>

Maintainer: Itoshi NIKAIDO <dritoshi at gmail.com>

Citation (from within R, enter citation("BrainStars")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BrainStars")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BrainStars")
BrainStars PDF R Script
Reference Manual PDF

Details

biocViews DataImport, Microarray, OneChannel, Software
Version 1.24.0
In Bioconductor since BioC 2.10 (R-2.15) (12 years)
License Artistic-2.0
Depends RCurl, Biobase, methods
Imports RJSONIO, Biobase
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BrainStars_1.24.0.tar.gz
Windows Binary BrainStars_1.24.0.zip
Mac OS X 10.11 (El Capitan) BrainStars_1.24.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BrainStars
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BrainStars
Package Short Url https://bioconductor.org/packages/BrainStars/
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Old Source Packages for BioC 3.7 Source Archive