pdmclass
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see pdmclass.
Classification of Microarray Samples using Penalized Discriminant Methods
Bioconductor version: 3.6
This package can be used to classify microarray data using one of three penalized regression methods; partial least squares, principal components regression, or ridge regression.
Author: James W. MacDonald, Debashis Ghosh, based in part on pls code of Mike Denham
Maintainer: James W. MacDonald <jmacdon at u.washington.edu>
citation("pdmclass")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pdmclass")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pdmclass")| pdmclass Overview | R Script | |
| Reference Manual |
Details
| biocViews | Classification, Software |
| Version | 1.47.0 |
| In Bioconductor since | BioC 1.7 (R-2.2) (18.5 years) |
| License | Artistic-2.0 |
| Depends | Biobase(>= 1.4.22), R (>= 1.9.0), fibroEset, mda |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | oneChannelGUI |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | pdmclass_1.47.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/pdmclass |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/pdmclass |
| Package Short Url | https://bioconductor.org/packages/pdmclass/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |