miRNAmeConverter
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see miRNAmeConverter.
Convert miRNA Names to Different miRBase Versions
Bioconductor version: 3.6
Package containing an S4 class for translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).
Author: Stefan Haunsberger [aut, cre]
Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>
citation("miRNAmeConverter")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("miRNAmeConverter")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("miRNAmeConverter")| miRNAmeConverter-vignette | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Preprocessing, Software, miRNA |
| Version | 1.6.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (8 years) |
| License | Artistic-2.0 |
| Depends | miRBaseVersions.db |
| Imports | DBI, AnnotationDbi |
| System Requirements | |
| URL |
See More
| Suggests | methods, testthat, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | miRNAmeConverter_1.6.0.tar.gz |
| Windows Binary | miRNAmeConverter_1.6.0.zip |
| Mac OS X 10.11 (El Capitan) | miRNAmeConverter_1.6.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/miRNAmeConverter |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/miRNAmeConverter |
| Package Short Url | https://bioconductor.org/packages/miRNAmeConverter/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |