coRNAi

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see coRNAi.

Analysis of co-knock-down RNAi data


Bioconductor version: 3.6

Analysis of combinatorial cell-based RNAi screens

Author: Elin Axelsson

Maintainer: Elin Axelsson <elin.axelsson at imp.ac.at>

Citation (from within R, enter citation("coRNAi")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("coRNAi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("coRNAi")
coRNAi PDF R Script
Reference Manual PDF

Details

biocViews CellBasedAssays, Software
Version 1.25.2
In Bioconductor since BioC 2.7 (R-2.12) (13.5 years)
License Artistic-2.0
Depends R (>= 2.10), cellHTS2, limma, locfit
Imports MASS, gplots, lattice, grDevices, graphics, stats
System Requirements Graphviz
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package coRNAi_1.25.2.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/coRNAi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/coRNAi
Package Short Url https://bioconductor.org/packages/coRNAi/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.6 Source Archive