alsace

This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see alsace.

ALS for the Automatic Chemical Exploration of mixtures


Bioconductor version: 3.6

Alternating Least Squares (or Multivariate Curve Resolution) for analytical chemical data, in particular hyphenated data where the first direction is a retention time axis, and the second a spectral axis. Package builds on the basic als function from the ALS package and adds functionality for high-throughput analysis, including definition of time windows, clustering of profiles, retention time correction, etcetera.

Author: Ron Wehrens

Maintainer: Ron Wehrens <ron.wehrens at gmail.com>

Citation (from within R, enter citation("alsace")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("alsace")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("alsace")
alsace PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Software
Version 1.14.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License GPL (>= 2)
Depends R (>= 2.10), ALS, ptw (>= 1.0.6)
Imports
System Requirements
URL https://github.com/rwehrens/alsace
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package alsace_1.14.0.tar.gz
Windows Binary alsace_1.14.0.zip
Mac OS X 10.11 (El Capitan) alsace_1.14.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/alsace
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/alsace
Package Short Url https://bioconductor.org/packages/alsace/
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Old Source Packages for BioC 3.6 Source Archive