EBcoexpress

This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see EBcoexpress.

EBcoexpress for Differential Co-Expression Analysis


Bioconductor version: 3.6

An Empirical Bayesian Approach to Differential Co-Expression Analysis at the Gene-Pair Level

Author: John A. Dawson

Maintainer: John A. Dawson <jadawson at wisc.edu>

Citation (from within R, enter citation("EBcoexpress")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBcoexpress")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBcoexpress")
EBcoexpress Demo PDF R Script
Reference Manual PDF

Details

biocViews Bayesian, Software
Version 1.22.0
In Bioconductor since BioC 2.10 (R-2.15) (12 years)
License GPL (>= 2)
Depends EBarrays, mclust, minqa
Imports
System Requirements
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Suggests graph, igraph, colorspace
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Depends On Me SRGnet
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EBcoexpress_1.22.0.tar.gz
Windows Binary EBcoexpress_1.22.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) EBcoexpress_1.22.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/EBcoexpress
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EBcoexpress
Package Short Url https://bioconductor.org/packages/EBcoexpress/
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Old Source Packages for BioC 3.6 Source Archive