Mainly to get the channel and marker information.
getFlowFrame(x)
x | flowSet, ncdfFlowList, GatingSet, GatingHierarchy, or GatingSetList |
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a flowFrame. When x is a ncdfFlowSet or GatingSet that is associated with ncdfFlowSet, the raw event data is not read and an empty flowFrame is returned.
#> flowFrame object 's5a01' #> with 3420 cells and 8 observables: #> name desc range minRange maxRange #> $P1 FSC-H FSC-Height 1024 0 1023 #> $P2 SSC-H SSC-Height 1024 0 1023 #> $P3 FL1-H CD15 FITC 1024 1 10000 #> $P4 FL2-H CD45 PE 1024 1 10000 #> $P5 FL3-H CD14 PerCP 1024 1 10000 #> $P6 FL2-A <NA> 1024 0 1023 #> $P7 FL4-H CD33 APC 1024 1 10000 #> $P8 Time Time (51.20 sec.) 1024 0 1023 #> 169 keywords are stored in the 'description' slotdataDir <- system.file("extdata",package="flowWorkspaceData") gs <- load_gs(list.files(dataDir, pattern = "gs_manual",full = TRUE)) getFlowFrame(gs)# gs is a GatingSet#> flowFrame object 'CytoTrol_CytoTrol_1.fcs' #> with 0 cells and 12 observables: #> name desc range minRange maxRange #> $P1 FSC-A <NA> 262142.000 0.0000 262142.000 #> $P2 FSC-H <NA> 262142.000 0.0000 262142.000 #> $P3 FSC-W <NA> 262142.000 0.0000 262142.000 #> $P4 SSC-A <NA> 262142.000 0.0000 262142.000 #> $P5 <B710-A> CD4 PcpCy55 4096.787 426.3119 4096.787 #> $P6 <R660-A> CD38 APC 4096.465 518.5215 4096.465 #> $P7 <R780-A> CD8 APCH7 4093.440 877.4007 4093.440 #> $P8 <V450-A> CD3 V450 4097.781 -903.5115 4097.781 #> $P9 <V545-A> HLA-DR V500 4097.264 213.4429 4097.264 #> $P10 <G560-A> CCR7 PE 4097.404 110.2343 4097.404 #> $P11 <G780-A> CD45RA PECy7 4096.723 448.9122 4096.723 #> $P12 Time <NA> 294.392 0.0020 294.392 #> 198 keywords are stored in the 'description' slot