MAIT

Statistical Analysis of Metabolomic Data


Bioconductor version: Release (3.19)

The MAIT package contains functions to perform end-to-end statistical analysis of LC/MS Metabolomic Data. Special emphasis is put on peak annotation and in modular function design of the functions.

Author: Francesc Fernandez-Albert, Rafael Llorach, Cristina Andres-LaCueva, Alexandre Perera

Maintainer: Pol Sola-Santos <pol.soladelossantos at gmail.com>

Citation (from within R, enter citation("MAIT")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MAIT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MAIT")
\maketitleMAIT Vignette PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.38.0
In Bioconductor since BioC 3.0 (R-3.1) (10 years)
License GPL-2
Depends R (>= 2.10), CAMERA, Rcpp, pls
Imports gplots, e1071, class, MASS, plsgenomics, agricolae, xcms, methods, caret
System Requirements
URL
See More
Suggests faahKO
Linking To
Enhances rgl
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MAIT_1.38.0.tar.gz
Windows Binary MAIT_1.38.0.zip
macOS Binary (x86_64) MAIT_1.38.0.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/MAIT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MAIT
Bioc Package Browser https://code.bioconductor.org/browse/MAIT/
Package Short Url https://bioconductor.org/packages/MAIT/
Package Downloads Report Download Stats