Changes in version 1.4.2                        

  - Added Fixed-width vignette & edited sliding window
  - Added se and peaks as example data for man pages and vignettes
  - Included defineRegions()
  - Enabled plotHFCG() without Ideogram tracks
  - Enabled use of offsets for normalisation in fitAssayDiff()

                        Changes in version 1.3.9                        

  - Changed labelling strategy for plotPie()

                        Changes in version 1.3.8                        

  - Added using coverage to makeConsensus()

                        Changes in version 1.3.7                        

  - Added plotAssayHeatmap()
  - Added fitAssayDiff() and added coercion of TopTags objects

                        Changes in version 1.3.6                        

  - Expanded arguments for plotSpliDonut()
  - Added mergeByHMP() for merging overlapping windows using the
    harmonic mean p

                        Changes in version 1.3.5                        

  - Added plotSplitDonut()
  - Bugfix in plotAssayDensities() and plotAssayRle() along with
    enabling plotting by group

                        Changes in version 1.3.4                        

  - Added mergeBySig()

                 Changes in version 1.1.5 (2022-10-11)                  

  - Added makeConsensus() and updated vignette

                 Changes in version 1.1.3 (2022-08-01)                  

  - Added plotOverlaps() for generation of Venn Diagrams and
    ComplexUpset plots

                 Changes in version 1.1.2 (2022-07-22)                  

  - Added collapseTranscripts = "auto" as the default for plotHFGC()
  - getProfileData() now returns log2 transformed data by default
  - getProfileData() now uses bplapply() internally
  - Bugfixes for plotPie(), distinctMC() colToRanges() and
    stitchRanges()

                 Changes in version 1.1.1 (2022-06-01)                  

  - Bugfix so as_tibble() respects original column names

                 Changes in version 0.99.0 (2022-03-28)                 

  - Submitted to Bioconductor