mygene

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see mygene.

Access MyGene.Info_ services


Bioconductor version: 3.17

MyGene.Info_ provides simple-to-use REST web services to query/retrieve gene annotation data. It's designed with simplicity and performance emphasized. *mygene*, is an easy-to-use R wrapper to access MyGene.Info_ services.

Author: Adam Mark, Ryan Thompson, Cyrus Afrasiabi, Chunlei Wu

Maintainer: Adam Mark, Cyrus Afrasiabi, Chunlei Wu <cwu at scripps.edu>

Citation (from within R, enter citation("mygene")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mygene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mygene")
Using mygene.R PDF R Script
Reference Manual PDF

Details

biocViews Annotation, Software
Version 1.36.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License Artistic-2.0
Depends R (>= 3.2.1), GenomicFeatures
Imports httr (>= 0.3), jsonlite (>= 0.9.7), S4Vectors, Hmisc, sqldf, plyr
System Requirements
URL
See More
Suggests BiocStyle
Linking To
Enhances
Depends On Me
Imports Me MetaboSignal
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mygene_1.36.0.tar.gz
Windows Binary mygene_1.36.0.zip
macOS Binary (x86_64) mygene_1.36.0.tgz
macOS Binary (arm64) mygene_1.36.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/mygene
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/mygene
Bioc Package Browser https://code.bioconductor.org/browse/mygene/
Package Short Url https://bioconductor.org/packages/mygene/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive