cycle

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see cycle.

Significance of periodic expression pattern in time-series data


Bioconductor version: 3.17

Package for assessing the statistical significance of periodic expression based on Fourier analysis and comparison with data generated by different background models

Author: Matthias Futschik <mfutschik at ualg.pt>

Maintainer: Matthias Futschik <mfutschik at ualg.pt>

Citation (from within R, enter citation("cycle")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cycle")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cycle")
Introduction to cycle PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Software, TimeCourse
Version 1.54.0
In Bioconductor since BioC 2.5 (R-2.10) (14.5 years)
License GPL-2
Depends R (>= 2.10.0), Mfuzz
Imports Biobase, stats
System Requirements
URL http://cycle.sysbiolab.eu
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cycle_1.54.0.tar.gz
Windows Binary cycle_1.54.0.zip
macOS Binary (x86_64) cycle_1.54.0.tgz
macOS Binary (arm64) cycle_1.54.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/cycle
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cycle
Bioc Package Browser https://code.bioconductor.org/browse/cycle/
Package Short Url https://bioconductor.org/packages/cycle/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive