crisprVerse

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see crisprVerse.

Easily install and load the crisprVerse ecosystem for CRISPR gRNA design


Bioconductor version: 3.17

The crisprVerse is a modular ecosystem of R packages developed for the design and manipulation of CRISPR guide RNAs (gRNAs). All packages share a common language and design principles. This package is designed to make it easy to install and load the crisprVerse packages in a single step. To learn more about the crisprVerse, visit .

Author: Jean-Philippe Fortin [aut, cre]

Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>

Citation (from within R, enter citation("crisprVerse")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("crisprVerse")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("crisprVerse")
crisprVerse HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews CRISPR, FunctionalGenomics, GeneTarget, Software
Version 1.2.0
In Bioconductor since BioC 3.16 (R-4.2) (1.5 years)
License MIT + file LICENSE
Depends R (>= 4.2.0)
Imports BiocManager, cli, crisprBase, crisprBowtie, crisprScore, crisprScoreData, crisprDesign, crisprViz, rlang, tools, utils
System Requirements
URL https://github.com/crisprVerse/crisprVerse
Bug Reports https://github.com/crisprVerse/crisprVerse/issues
See More
Suggests BiocStyle, knitr, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package crisprVerse_1.2.0.tar.gz
Windows Binary crisprVerse_1.2.0.zip
macOS Binary (x86_64) crisprVerse_1.2.0.tgz
macOS Binary (arm64) crisprVerse_1.2.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/crisprVerse
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/crisprVerse
Bioc Package Browser https://code.bioconductor.org/browse/crisprVerse/
Package Short Url https://bioconductor.org/packages/crisprVerse/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive