Changes in version 1.9.3                        

  - minor spelling and layout fixes to vignette,
  - @PeteHaitch corrected table layout in vignette

                        Changes in version 1.9.2                        

  - minor documentation fixes

                        Changes in version 1.9.1                        

  - Spencer Nystrom has made several significant contributions to the
    join_nearest family of functions:
    
    1.  join_nearest_(x, y, ..., distance = TRUE) family of functions
        now takes a new argument, distance, which allows the user to add
        a column for the distance of the nearest range y to that in x.
    2.  add_nearest_distance_(x, y, ...) family of functions, which will
        add a new metadata column to the x ranges object which contains
        the distance to its nearest neighbor in y. If there are no
        nearest neighbors, the new column will be given a missing value.

                       Changes in version 1.7.16                        

  - refactoring of select internals, improved speed when casting a
    GRanges -> DataFrame

                       Changes in version 1.7.15                        

  - further fixes to reduce/disjoin internals

                       Changes in version 1.7.14                        

  - fixes reduce/disjoin internals cleans up disjoin cases when an
    expansion occurs

                       Changes in version 1.7.13                        

  - set tidyselect version to be v 1.0
  - set coverage method for delegating ranges
  - fix docs for bam reading

                       Changes in version 1.7.11                        

  - move from tidyselect::vars_select() to tidyselect::eval_select()

                        Changes in version 1.7.7                        

  - update handling of list columns, expand_ranges() no longer takes
    cartesian product if lists are parallel. summarize() properly
    handles list column output without blowing out number of columns.

                        Changes in version 1.7.6                        

  - adds method for dplyr::sample_n()

                        Changes in version 1.7.5                        

  - fixed issue #62 for Ranges construction, the as_granges() and
    as_iranges() functions now handle List columns correctly
  - added in helper functions for dealing with names in Ranges. See
    ?ranges-names for details.

                        Changes in version 1.7.4                        

  - added slice() for Ranges, and GroupedRanges
  - internals of grouping have been overhauled, but there shouldn't be
    any user facing changes. It is now much faster to generate
    groupings.
  - group information can be interrogated with dplyr::group_keys()
  - a GRangesList can be obtained automatically from a
    GroupedGenomicRanges with dplyr::group_split()
  - group indices can be generated with dplyr::group_indices()

                        Changes in version 1.7.3                        

  - shift_downstream() and shift_upstream() now properly handle vector
    amounts of shift. Fixes issue #73

                        Changes in version 1.7.2                        

  - Left outer join overlap operations now work if either x or y have no
    metadata columns see #70
  - Left outer join overlap operations will also correctly behave in
    situations when there are no non-overlapping ranges.
  - Left outer join overlaps no longer modify seqinfo (see
    here)[https://support.bioconductor.org/p/125623/]
  - patch left outer join when x or y are IRanges, flesh out overlaps
    documentation.

                        Changes in version 1.7.1                        

  - Reformatting NEWS.md so no longer softlinks to inst/NEWS

                       Changes in version 1.5.13                        

  - plyranges release and devel have removed unnest() and replaced it
    with expand_ranges() due to changes in the tidyr API. Please replace
    all uses of this function with expand_ranges()

                        Changes in version 1.3.4                        

  - fixed bind_ranges so it preserves rownames

                        Changes in version 1.1.5                        

  - enable right generics to be called upon invoking plyranges functions
    without loading plyranges

                        Changes in version 1.1.4                        

  - added tile/window methods
  - fixed up documentation

                        Changes in version 1.1.3                        

  - doc updates

                        Changes in version 1.1.2                        

  - speed up of group_by methods
  - refactor of BAM reading utilities

                       Changes in version 0.99.10                       

  - refactored set_width out so it's called internally by mutate
  - along with set_width there are other internal set_ methods
  - add _within_directed variants for overlaps methods
  - modified overscope_ranges to be an S3 method, should enable more
    refactoring in the future

                       Changes in version 0.99.9                        

https://bioconductor.org/packages/devel/bioc/html/plyranges.html

  - package passed review and is now on Bioconductor devel branch!
  - I've been pretty slack with updating the NEWS file but will be more
    diligent in the future.