Changes in version 0.99.4 - Combined vignettes into a single one - Updated references Changes in version 0.99.3 - Update reference for cell composition - Accepted into bioconductor, will be released in next cycle Changes in version 0.99.2 - Vignettes updated with new function names - Removed minfi from examples since installation fails on some R versions - Moved .orig files to inst/script - Moved data-raw/ contents to inst/script - Moved man/figures/logo.png to inst/figures/logo.png, updated README - Lazydata set to false Changes in version 0.99.0 - Improved vignette figure quality - Using github-actions check from biocthis - Removed viridis from suggests - Rewrote many data man pages Changes in version 0.3.0 - Final preparations for Bioconductor submission - Changed license to => GPL-2 - More detailed attribution to glmnet - Renamed all functions to camel case convention, including functions, data, tests, documentation, vignettes - Added planet-deprecated.R - pl_infer_ethnicity() and pl_infer_age() now deprecated, replaced with predictEthnicity and predictAge, respectively. Changes in version 0.2.36 - Removed minfi dependency - Addressed all fixable >line80 and 4 space indent notes from BiocCheck - Precompiling vignettes. Changes in version 0.2.35 - added hexsticker - updated zenodo doi - added github actions - added cells color palette - favicons - Fixed in-text citations in README Changes in version 0.2.34 - Reduced nbeta from 4 mb to 30 kb - Removed Matrix dependency from imports Changes in version 0.2.33 - Fixed pl_infer_age() when missing CpGs - Added tests for pl_infer_age() and pl_infer_ethnicity() - Updated documentation Changes in version 0.2.32 - Added vignettes - Reduced README significantly - Format documentation for Bioconductor style - Added BiocViews to DESCRIPTION - Wrap lines max 80 characters - Create CITATION - Add Wendy Robinson to authors Changes in version 0.2.3 - Fixes data export error on linux. See #6 Changes in version 0.2.2 - Export nbeta, instead of keeping internal - This fixes the install errors - On linux, data objects are not properly exported. See #2 Changes in version 0.2.1 - added syncytiotrophoblast reference cpgs Changes in version 0.2.0 - added pl_cell_cpgs_first and pl_cell_cpgs_third for cell composition inference Changes in version 0.1.1 - copied glmnet:::glment_softmax code to be compatible with new glmnet version Changes in version 0.1.0 - Added pl_infer_age to infer gestational age using Lee Y et al. placental DNAm clock. - Modified example data to contain less probes and more samples, to save space but still be useful in the examples. Changes in version 0.0.1.9000 - Added a NEWS.md file to track changes to the package.