## ----eval=FALSE--------------------------------------------------------------- # library(BiocCheck) # BiocCheck("packageDirOrTarball") ## ----echo=FALSE--------------------------------------------------------------- suppressPackageStartupMessages(library(BiocCheck)) usage() ## ----eval=FALSE--------------------------------------------------------------- # if (!"BiocManager" %in% rownames(installed.packages())) # install.packages("BiocManager") # BiocManager::install("BiocCheck") ## ----reformat_code, eval = FALSE---------------------------------------------- # ## Install styler if necessary # if (!requireNamespace("styler", quietly = TRUE)) { # install.packages("styler") # } # ## Automatically re-format the R code in your package # styler::style_pkg(transformers = styler::tidyverse_style(indent_by = 4)) ## ----eval=FALSE--------------------------------------------------------------- # library(BiocCheck) # BiocCheckGitClone("packageDir") ## ----sessionInfo-------------------------------------------------------------- sessionInfo()