ribor
This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see ribor.
An R Interface for Ribo Files
Bioconductor version: 3.13
The ribor package provides an R Interface for .ribo files. It provides functionality to read the .ribo file, which is of HDF5 format, and performs common analyses on its contents.
Author: Michael Geng [cre, aut], Hakan Ozadam [aut], Can Cenik [aut]
Maintainer: Michael Geng <michaelgeng at utexas.edu>
citation("ribor")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ribor")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ribor")| A Walkthrough of RiboR | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure, Software |
| Version | 1.4.0 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4 years) |
| License | GPL-3 |
| Depends | R (>= 3.6.0) |
| Imports | dplyr, ggplot2, hash, methods, rhdf5, rlang, stats, S4Vectors, tidyr, tools, yaml |
| System Requirements | |
| URL |
See More
| Suggests | testthat, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ribor_1.4.0.tar.gz |
| Windows Binary | ribor_1.4.0.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | ribor_1.4.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ribor |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ribor |
| Bioc Package Browser | https://code.bioconductor.org/browse/ribor/ |
| Package Short Url | https://bioconductor.org/packages/ribor/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.13 | Source Archive |