lpsymphony

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see lpsymphony.

Symphony integer linear programming solver in R


Bioconductor version: 3.13

This package was derived from Rsymphony_0.1-17 from CRAN. These packages provide an R interface to SYMPHONY, an open-source linear programming solver written in C++. The main difference between this package and Rsymphony is that it includes the solver source code (SYMPHONY version 5.6), while Rsymphony expects to find header and library files on the users' system. Thus the intention of lpsymphony is to provide an easy to install interface to SYMPHONY. For Windows, precompiled DLLs are included in this package.

Author: Vladislav Kim [aut, cre], Ted Ralphs [ctb], Menal Guzelsoy [ctb], Ashutosh Mahajan [ctb], Reinhard Harter [ctb], Kurt Hornik [ctb], Cyrille Szymanski [ctb], Stefan Theussl [ctb]

Maintainer: Vladislav Kim <Vladislav.Kim at embl.de>

Citation (from within R, enter citation("lpsymphony")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("lpsymphony")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("lpsymphony")
Introduction to lpsymphony PDF R Script
Reference Manual PDF

Details

biocViews Infrastructure, Software, ThirdPartyClient
Version 1.20.0
In Bioconductor since BioC 3.3 (R-3.3) (8 years)
License EPL
Depends R (>= 3.0.0)
Imports
System Requirements GNU make
URL http://R-Forge.R-project.org/projects/rsymphony https://projects.coin-or.org/SYMPHONY http://www.coin-or.org/download/source/SYMPHONY/
See More
Suggests BiocStyle, knitr, testthat
Linking To
Enhances slam
Depends On Me
Imports Me IHW, Maaslin2
Suggests Me oppr, TestDesign
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package lpsymphony_1.20.0.tar.gz
Windows Binary lpsymphony_1.20.0.zip
macOS 10.13 (High Sierra) lpsymphony_1.20.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/lpsymphony
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/lpsymphony
Bioc Package Browser https://code.bioconductor.org/browse/lpsymphony/
Package Short Url https://bioconductor.org/packages/lpsymphony/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.13 Source Archive