interactiveDisplayBase

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see interactiveDisplayBase.

Base package for enabling powerful shiny web displays of Bioconductor objects


Bioconductor version: 3.13

The interactiveDisplayBase package contains the the basic methods needed to generate interactive Shiny based display methods for Bioconductor objects.

Author: Shawn Balcome [aut, cre], Marc Carlson [ctb], Marcel Ramos [ctb]

Maintainer: Shawn Balcome <balc0022 at umn.edu>

Citation (from within R, enter citation("interactiveDisplayBase")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("interactiveDisplayBase")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("interactiveDisplayBase")
Using interactiveDisplayBase for Bioconductor object visualization and modification HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, Classification, DataRepresentation, GO, GUI, GeneExpression, Genetics, Microarray, Network, QualityControl, Sequencing, Software, Visualization
Version 1.30.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License Artistic-2.0
Depends R (>= 2.10), methods, BiocGenerics
Imports shiny, DT
System Requirements
URL
See More
Suggests knitr
Linking To
Enhances rstudioapi
Depends On Me
Imports Me AnnotationHub, interactiveDisplay
Suggests Me recount3
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package interactiveDisplayBase_1.30.0.tar.gz
Windows Binary interactiveDisplayBase_1.30.0.zip
macOS 10.13 (High Sierra) interactiveDisplayBase_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/interactiveDisplayBase
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/interactiveDisplayBase
Bioc Package Browser https://code.bioconductor.org/browse/interactiveDisplayBase/
Package Short Url https://bioconductor.org/packages/interactiveDisplayBase/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.13 Source Archive